Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC6A4P31645 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 U2.22-201ENST00000636441 106 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 Y_RNA.52-201ENST00000362760 96 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 AL603914.1-201ENST00000401964 204 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 MIR1267-201ENST00000408723 78 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 AL161935.2-201ENST00000414627 60 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 MTND4LP9-201ENST00000427694 174 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 RNU4-57P-201ENST00000515980 135 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 AP003484.1-201ENST00000530974 250 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 MIR4778-201ENST00000577635 80 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC6A4P31645 MIR7111-201ENST00000619751 72 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
SLC6A4P31645 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC6A4P31645 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
SLC6A4P31645 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 RNU6-915P-201ENST00000364943 103 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC6A4P31645 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 Y_RNA.692-201ENST00000516627 105 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC6A4P31645 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
SLC6A4P31645 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SLC6A4P31645 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
SLC6A4P31645 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SLC6A4P31645 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 RNU6-203P-201ENST00000384038 104 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 SNORA40.5-201ENST00000391061 128 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 AC093850.1-201ENST00000454121 251 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 AC107297.1-201ENST00000459991 176 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 RNU6-322P-201ENST00000516010 103 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC6A4P31645 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.11
SLC6A4P31645 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SLC6A4P31645 AL157777.2-201ENST00000258070 137 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-34-201ENST00000362441 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-12-201ENST00000362583 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-29-201ENST00000362834 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-9-201ENST00000362912 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-21-201ENST00000362963 81 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-14-201ENST00000363090 81 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 RNY1P10-201ENST00000363268 113 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-13-201ENST00000363358 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-41-201ENST00000363608 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-11-201ENST00000363616 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-5-201ENST00000363633 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-39-201ENST00000363694 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-4-201ENST00000363810 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-16-201ENST00000363887 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-6-201ENST00000363942 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-42-201ENST00000364273 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-15-201ENST00000364809 81 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-1-201ENST00000364961 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-26-201ENST00000365067 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-10-201ENST00000365073 81 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-43-201ENST00000365503 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-36-201ENST00000365629 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORA20-201ENST00000384662 132 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 RNU6-959P-201ENST00000384671 107 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SLC6A4P31645 U8.17-201ENST00000391292 132 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 RNA5SP272-201ENST00000516095 111 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 SNORD115-40-201ENST00000606510 82 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
SLC6A4P31645 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SLC6A4P31645 Y_RNA.454-201ENST00000384224 113 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 RNU6-1117P-201ENST00000384525 104 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 SNORA19-201ENST00000384737 128 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 MIR513A1-201ENST00000385138 129 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 MIR516B2-201ENST00000385190 85 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 RNU7-80P-201ENST00000459562 61 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 Y_RNA.690-201ENST00000516603 95 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 RNU6-1149P-201ENST00000516810 97 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 RNU6-250P-201ENST00000516958 103 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
SLC6A4P31645 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC6A4P31645 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SLC6A4P31645 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
SLC6A4P31645 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SLC6A4P31645 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.81□□□□□ -2.12
SLC6A4P31645 U8.1-201ENST00000362843 134 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 Y_RNA.440-201ENST00000384120 114 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNU6-1067P-201ENST00000384752 107 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNU6-938P-201ENST00000411285 103 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNU6-113P-201ENST00000516653 101 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 SNORD36C-201ENST00000516733 66 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 SCARNA15-202ENST00000516881 127 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 SNORA18.7-201ENST00000516910 131 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNU7-70P-201ENST00000516941 66 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms