Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
XPAP23025 RNU6-1123P-201ENST00000362347 106 ntBASIC1.96□□□□□ -2.1
XPAP23025 RNU6-235P-201ENST00000362644 107 ntBASIC1.96□□□□□ -2.1
XPAP23025 RNU6-414P-201ENST00000363705 104 ntBASIC1.96□□□□□ -2.1
XPAP23025 Y_RNA.261-201ENST00000364631 102 ntBASIC1.96□□□□□ -2.1
XPAP23025 SNORD18B-201ENST00000365659 72 ntBASIC1.96□□□□□ -2.1
XPAP23025 SNORD28B-201ENST00000390993 75 ntBASIC1.96□□□□□ -2.1
XPAP23025 JTBP1-201ENST00000441314 247 ntBASIC1.96□□□□□ -2.1
XPAP23025 Y_RNA.692-201ENST00000516627 105 ntBASIC1.96□□□□□ -2.1
XPAP23025 DEFB122-202ENST00000569013 197 ntBASIC1.96□□□□□ -2.1
XPAP23025 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
XPAP23025 AL022345.2-201ENST00000606307 135 ntBASIC1.96□□□□□ -2.1
XPAP23025 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
XPAP23025 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
XPAP23025 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
XPAP23025 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
XPAP23025 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
XPAP23025 AC087499.4-201ENST00000448505 178 ntBASIC1.95□□□□□ -2.1
XPAP23025 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
XPAP23025 RNU7-107P-201ENST00000459121 61 ntBASIC1.95□□□□□ -2.1
XPAP23025 SNORA18.7-201ENST00000516910 131 ntBASIC1.95□□□□□ -2.1
XPAP23025 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
XPAP23025 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
XPAP23025 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
XPAP23025 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
XPAP23025 Y_RNA.114-201ENST00000363265 113 ntBASIC1.94□□□□□ -2.1
XPAP23025 Y_RNA.241-201ENST00000364470 117 ntBASIC1.94□□□□□ -2.1
XPAP23025 Y_RNA.280-201ENST00000364765 112 ntBASIC1.94□□□□□ -2.1
XPAP23025 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
XPAP23025 RPS26P48-201ENST00000491713 339 ntBASIC1.94□□□□□ -2.1
XPAP23025 MIR548AR-201ENST00000582191 57 ntBASIC1.94□□□□□ -2.1
XPAP23025 AC108081.1-201ENST00000604358 221 ntBASIC1.94□□□□□ -2.1
XPAP23025 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
XPAP23025 MIR7843-201ENST00000622274 79 ntBASIC1.94□□□□□ -2.1
XPAP23025 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
XPAP23025 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
XPAP23025 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
XPAP23025 MIR342-201ENST00000362212 99 ntBASIC1.93□□□□□ -2.1
XPAP23025 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
XPAP23025 SNORA22C-201ENST00000384614 134 ntBASIC1.93□□□□□ -2.1
XPAP23025 MIR570-201ENST00000384917 97 ntBASIC1.93□□□□□ -2.1
XPAP23025 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
XPAP23025 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
XPAP23025 SNORD123-201ENST00000459473 70 ntBASIC1.93□□□□□ -2.1
XPAP23025 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
XPAP23025 AC090821.2-201ENST00000523552 176 ntBASIC1.93□□□□□ -2.1
XPAP23025 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
XPAP23025 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
XPAP23025 Y_RNA.351-201ENST00000365436 96 ntBASIC1.92□□□□□ -2.1
XPAP23025 RNU6-80P-201ENST00000384195 107 ntBASIC1.92□□□□□ -2.1
XPAP23025 SNORA27-201ENST00000384323 126 ntBASIC1.92□□□□□ -2.1
XPAP23025 MIR513A1-201ENST00000385138 129 ntBASIC1.92□□□□□ -2.1
XPAP23025 RNU6-1168P-201ENST00000390831 104 ntBASIC1.92□□□□□ -2.1
XPAP23025 SNORA40.5-201ENST00000391061 128 ntBASIC1.92□□□□□ -2.1
XPAP23025 SNORA40.18-201ENST00000391200 128 ntBASIC1.92□□□□□ -2.1
XPAP23025 AC005908.1-201ENST00000468701 347 ntBASIC1.92□□□□□ -2.1
XPAP23025 SNORA31.4-201ENST00000516049 129 ntBASIC1.92□□□□□ -2.1
XPAP23025 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
XPAP23025 RNU6-1333P-201ENST00000516162 93 ntBASIC1.92□□□□□ -2.1
XPAP23025 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
XPAP23025 Y_RNA.757-201ENST00000578934 114 ntBASIC1.92□□□□□ -2.1
XPAP23025 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
XPAP23025 Y_RNA.127-201ENST00000363386 109 ntBASIC1.91□□□□□ -2.1
XPAP23025 Y_RNA.291-201ENST00000364886 113 ntBASIC1.91□□□□□ -2.1
XPAP23025 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNORD116-14-201ENST00000383894 92 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNORD116-17-201ENST00000383929 92 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNORD116-15-201ENST00000384445 92 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNORD116-19-201ENST00000384729 92 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNX2P2-201ENST00000424553 323 ntBASIC1.91□□□□□ -2.1
XPAP23025 AL158147.1-201ENST00000443970 75 ntBASIC1.91□□□□□ -2.1
XPAP23025 RNU6-62P-201ENST00000516526 102 ntBASIC1.91□□□□□ -2.1
XPAP23025 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
XPAP23025 IGKV1-22-201ENST00000524313 326 ntBASIC1.91□□□□□ -2.1
XPAP23025 HSPE1P19-201ENST00000603327 295 ntBASIC1.91□□□□□ -2.1
XPAP23025 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
XPAP23025 SNORD115-34-201ENST00000362441 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-12-201ENST00000362583 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-29-201ENST00000362834 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-9-201ENST00000362912 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-21-201ENST00000362963 81 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-14-201ENST00000363090 81 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-13-201ENST00000363358 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-41-201ENST00000363608 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-11-201ENST00000363616 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-5-201ENST00000363633 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-39-201ENST00000363694 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-4-201ENST00000363810 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-16-201ENST00000363887 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-6-201ENST00000363942 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-42-201ENST00000364273 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-15-201ENST00000364809 81 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-1-201ENST00000364961 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-26-201ENST00000365067 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-10-201ENST00000365073 81 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-43-201ENST00000365503 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 Y_RNA.370-201ENST00000365589 108 ntBASIC1.9□□□□□ -2.11
XPAP23025 SNORD115-36-201ENST00000365629 82 ntBASIC1.9□□□□□ -2.11
XPAP23025 RNU6-1154P-201ENST00000391001 104 ntBASIC1.9□□□□□ -2.11
XPAP23025 RNU2-51P-201ENST00000410708 197 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms