Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 Y_RNA.346-201ENST00000365385 112 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 SNORD38C-201ENST00000384381 69 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 Y_RNA.547-201ENST00000384654 119 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 MIR9-3-201ENST00000385084 90 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 AL591806.2-201ENST00000433122 173 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 RNU6-1149P-201ENST00000516810 97 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 IGKV1-22-201ENST00000524313 326 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 MTND5P34-201ENST00000568888 325 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PDE6AP16499 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
PDE6AP16499 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.24□□□□□ -2.05
PDE6AP16499 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 SNORD115-28-201ENST00000363931 81 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.24□□□□□ -2.05
PDE6AP16499 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 RPS26P48-201ENST00000491713 339 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 AC021506.2-201ENST00000612354 169 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 AL513423.1-201ENST00000621695 132 ntBASIC2.24□□□□□ -2.05
PDE6AP16499 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDE6AP16499 SNORA63.4-201ENST00000362763 126 ntBASIC2.23□□□□□ -2.05
PDE6AP16499 SNORA26.9-201ENST00000391322 122 ntBASIC2.23□□□□□ -2.05
PDE6AP16499 RNU5E-3P-201ENST00000515913 68 ntBASIC2.23□□□□□ -2.05
PDE6AP16499 AC025166.1-201ENST00000612411 163 ntBASIC2.23□□□□□ -2.05
PDE6AP16499 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.23□□□□□ -2.05
PDE6AP16499 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PDE6AP16499 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 SNORD116-21-201ENST00000384507 92 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 MIR548A3-201ENST00000385297 97 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 RNU6-360P-201ENST00000390944 104 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 snoU13.23-201ENST00000458863 104 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 RNU6-830P-201ENST00000516353 107 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 SNORA31.17-201ENST00000516953 127 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 AC015726.2-201ENST00000620112 122 ntBASIC2.22□□□□□ -2.05
PDE6AP16499 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PDE6AP16499 MTND5P18-201ENST00000445624 1801 ntBASIC2.21□□□□□ -2.05
PDE6AP16499 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.05
PDE6AP16499 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDE6AP16499 Y_RNA.37-201ENST00000362606 108 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 RNU6-1189P-201ENST00000383958 107 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 RNA5SP136-201ENST00000410906 107 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 RNU6-938P-201ENST00000411285 103 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 AC015922.2-201ENST00000435593 184 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 AC099513.1-201ENST00000490423 301 ntBASIC2.21□□□□□ -2.06
PDE6AP16499 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.21□□□□□ -2.06
PDE6AP16499 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.21□□□□□ -2.06
PDE6AP16499 Y_RNA.35-201ENST00000362601 101 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 MIR660-201ENST00000385235 97 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PDE6AP16499 RNA5SP212-201ENST00000391223 107 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 PGBD4P5-201ENST00000445958 426 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 AC087499.4-201ENST00000448505 178 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 RNA5SP57-201ENST00000459463 123 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
PDE6AP16499 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
PDE6AP16499 SNORA22-201ENST00000383907 134 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 MIR452-201ENST00000385020 85 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 Y_RNA.649-201ENST00000459077 103 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 AL121890.5-201ENST00000620848 304 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PDE6AP16499 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PDE6AP16499 AL391516.1-201ENST00000554380 2449 ntBASIC2.19□□□□□ -2.06
PDE6AP16499 MIR424-201ENST00000362227 98 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 Y_RNA.440-201ENST00000384120 114 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 RNU6-880P-201ENST00000384526 107 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 DEFB122-202ENST00000569013 197 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.18□□□□□ -2.06
PDE6AP16499 SNORD3E-202ENST00000627253 216 ntBASIC2.18□□□□□ -2.06
PDE6AP16499 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDE6AP16499 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PDE6AP16499 RNU6-349P-201ENST00000362402 107 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 SNORA16.1-201ENST00000364597 132 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 SNORA2.2-201ENST00000365473 135 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 Y_RNA.366-201ENST00000365540 102 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 AC093850.1-201ENST00000454121 251 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 COX6CP6-201ENST00000490840 228 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 SNORD36C-201ENST00000516733 66 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 AP003484.1-201ENST00000530974 250 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
PDE6AP16499 AL137067.1-201ENST00000615933 120 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 AC084768.2-201ENST00000622736 221 ntBASIC2.17□□□□□ -2.06
PDE6AP16499 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDE6AP16499 MIR1263-201ENST00000408324 86 ntBASIC2.16□□□□□ -2.06
PDE6AP16499 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
PDE6AP16499 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
PDE6AP16499 MIR3613-201ENST00000579844 87 ntBASIC2.16□□□□□ -2.06
PDE6AP16499 MIR4524B-201ENST00000581569 115 ntBASIC2.16□□□□□ -2.06
PDE6AP16499 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.07
PDE6AP16499 Y_RNA.281-201ENST00000364774 94 ntBASIC2.15□□□□□ -2.07
PDE6AP16499 Y_RNA.528-201ENST00000384575 108 ntBASIC2.15□□□□□ -2.07
PDE6AP16499 MIR570-201ENST00000384917 97 ntBASIC2.15□□□□□ -2.07
PDE6AP16499 MIR548A1-201ENST00000385041 97 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms