Protein–RNA interactions for Protein: P0CW19

LIMS3, LIM and senescent cell antigen-like-containing domain protein 3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3P0CW19 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 SNORD77.3-201ENST00000391113 65 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 RNU6-938P-201ENST00000411285 103 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.57□□□□□ -2.5
LIMS3P0CW19 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 RNU7-149P-201ENST00000516739 59 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 RNU6-264P-201ENST00000517134 104 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 AC007751.1-201ENST00000529260 376 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 MIR4423-201ENST00000580922 80 ntBASIC-0.57□□□□□ -2.5
LIMS3P0CW19 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.57□□□□□ -2.5
LIMS3P0CW19 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 RNU6-291P-201ENST00000384720 107 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 RNA5SP237-201ENST00000410414 113 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 RNU7-96P-201ENST00000459535 64 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 MIR8064-201ENST00000612863 90 ntBASIC-0.58□□□□□ -2.5
LIMS3P0CW19 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
LIMS3P0CW19 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU6-535P-201ENST00000384722 107 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 MIR489-201ENST00000384923 84 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 MIR501-201ENST00000390204 84 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU7-169P-201ENST00000459456 61 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU6-180P-201ENST00000516697 61 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 RNU2-60P-201ENST00000517290 128 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 U7.6-201ENST00000610841 64 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 AP001282.2-201ENST00000616149 309 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 AL662814.1-201ENST00000617364 121 ntBASIC-0.59□□□□□ -2.5
LIMS3P0CW19 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 SNORD81.1-201ENST00000363064 77 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 RNA5SP457-201ENST00000363657 124 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 SNORA72.4-201ENST00000384174 132 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 MIR628-201ENST00000385229 95 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 RNU2-11P-201ENST00000459191 187 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 RNU6-911P-201ENST00000516523 104 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 MIR548AD-201ENST00000584780 82 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 U2.1-201ENST00000618978 145 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 U6.92-201ENST00000636464 89 ntBASIC-0.6□□□□□ -2.51
LIMS3P0CW19 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 U8.15-201ENST00000390947 134 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 AC006157.1-201ENST00000611750 366 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 AC122108.2-201ENST00000611946 526 ntBASIC-0.61□□□□□ -2.51
LIMS3P0CW19 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 SNORA72.6-201ENST00000384520 129 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 RNU2-14P-201ENST00000411053 191 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 RNU6-998P-201ENST00000515894 101 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 AP003072.1-201ENST00000531740 145 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 MIR5706-201ENST00000579841 80 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 MIR4491-201ENST00000581087 68 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 MIR3666-201ENST00000607845 111 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 AC010205.1-201ENST00000616668 449 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 AL669831.3-213ENST00000636676 183 ntBASIC-0.62□□□□□ -2.51
LIMS3P0CW19 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 RNA5SP261-201ENST00000410536 106 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 MTND3P8-201ENST00000412909 339 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 HMGN2P22-201ENST00000427588 175 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.63□□□□□ -2.51
LIMS3P0CW19 RNU6-475P-201ENST00000516073 104 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 RNU6-693P-201ENST00000516134 107 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 SNORD36C-201ENST00000516733 66 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 MIR4662B-201ENST00000579498 81 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 MIR3145-201ENST00000580727 82 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 AC011373.1-201ENST00000607270 237 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 AL442067.1-201ENST00000613261 223 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 AP000770.2-201ENST00000623694 100 ntBASIC-0.63□□□□□ -2.51
LIMS3P0CW19 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6-653P-201ENST00000363074 106 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6-144P-201ENST00000383951 107 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6-708P-201ENST00000384217 107 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU6-120P-201ENST00000516077 103 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 RNU2-31P-201ENST00000516954 155 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 AC245505.1-201ENST00000556398 224 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 MTND5P34-201ENST00000568888 325 ntBASIC-0.64□□□□□ -2.51
LIMS3P0CW19 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
LIMS3P0CW19 AL670379.3-201ENST00000605040 251 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms