Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR3914-2-201ENST00000637339 95 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 MIR4679-1-201ENST00000637619 75 ntBASIC1.52□□□□□ -2.17
COL2A1P02458 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.52□□□□□ -2.17
COL2A1P02458 Y_RNA.52-201ENST00000362760 96 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RNU6-1255P-201ENST00000363434 112 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 Y_RNA.563-201ENST00000384707 108 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 U6atac.2-201ENST00000408644 118 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RNA5SP89-201ENST00000410300 108 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RNU2-48P-201ENST00000410694 191 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 AC008134.1-201ENST00000420943 193 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 OR9P1P-201ENST00000496431 281 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RN7SKP19-201ENST00000516016 252 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RN7SKP179-201ENST00000516126 217 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 Y_RNA.712-201ENST00000517011 92 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 AC022202.1-201ENST00000613515 211 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 U6.73-201ENST00000619194 103 ntBASIC1.51□□□□□ -2.17
COL2A1P02458 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL2A1P02458 SNORD116-21-201ENST00000384507 92 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
COL2A1P02458 EDDM3CP-201ENST00000415977 425 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 SNRPGP10-201ENST00000432323 225 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.5□□□□□ -2.17
COL2A1P02458 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.5□□□□□ -2.17
COL2A1P02458 RNU7-26P-201ENST00000458980 63 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 Y_RNA.651-201ENST00000459380 103 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RPS27P21-201ENST00000486977 252 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.5□□□□□ -2.17
COL2A1P02458 AC011406.1-201ENST00000512440 370 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNU6-589P-201ENST00000516485 107 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNU6-365P-201ENST00000517113 106 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNA5SP170-201ENST00000517150 101 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNU6-667P-201ENST00000517186 102 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 AC007751.1-201ENST00000529260 376 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 MTND5P18-201ENST00000445624 1801 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 Y_RNA.66-201ENST00000362862 102 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 SNORD68-201ENST00000363214 84 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 Y_RNA.120-201ENST00000363304 110 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNA5SP125-201ENST00000364843 120 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 SNORD58C-201ENST00000365223 64 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RNY4P30-201ENST00000410216 95 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RPS26P45-201ENST00000471748 340 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 MIR2681-201ENST00000581814 105 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 RN7SL793P-201ENST00000583259 296 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 AL670379.3-201ENST00000605040 251 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 AC025166.1-201ENST00000612411 163 ntBASIC1.5□□□□□ -2.17
COL2A1P02458 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.5□□□□□ -2.17
COL2A1P02458 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL2A1P02458 RNU6-862P-201ENST00000362804 105 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 Y_RNA.253-201ENST00000364562 112 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 RNU6-220P-201ENST00000390919 107 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 AL603914.1-201ENST00000401964 204 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.49□□□□□ -2.17
COL2A1P02458 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.49□□□□□ -2.17
COL2A1P02458 Y_RNA.649-201ENST00000459077 103 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 AC018868.1-201ENST00000491307 315 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 AL163195.1-201ENST00000496941 348 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 SCARNA11.3-201ENST00000517276 130 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 AL591926.4-201ENST00000616895 298 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 MIR376A2-201ENST00000636782 80 ntBASIC1.49□□□□□ -2.17
COL2A1P02458 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL2A1P02458 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 MIR342-201ENST00000362212 99 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 Y_RNA.332-201ENST00000365271 113 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 Y_RNA.528-201ENST00000384575 108 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 MIR562-201ENST00000384894 95 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 AC063976.4-201ENST00000421971 163 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 AF228730.3-201ENST00000436691 102 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 RNU6-168P-201ENST00000516189 101 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 RNA5SP153-201ENST00000516498 76 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 RNU6-1116P-201ENST00000517269 99 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 AC091178.2-201ENST00000584401 117 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 HSPE1P19-201ENST00000603327 295 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 U6.108-201ENST00000637764 58 ntBASIC1.48□□□□□ -2.17
COL2A1P02458 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL2A1P02458 RNU6-834P-201ENST00000362367 110 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNU6-1084P-201ENST00000362498 107 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 SNORA1B-201ENST00000362535 133 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 SNORA38-201ENST00000363946 132 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 SNORA68.1-201ENST00000364537 132 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 Y_RNA.280-201ENST00000364765 112 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 Y_RNA.366-201ENST00000365540 102 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 SNORA8-201ENST00000384574 139 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNY1P4-201ENST00000384595 115 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 Y_RNA.549-201ENST00000384657 102 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 SNORD77.3-201ENST00000391113 65 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 MIR1262-201ENST00000408276 93 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 Y_RNA.617-201ENST00000410920 90 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 RNA5SP127-201ENST00000411051 133 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 AL606517.2-201ENST00000442855 241 ntBASIC1.47□□□□□ -2.17
COL2A1P02458 AL049830.1-201ENST00000468034 425 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms