Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-504P-201ENST00000516568 104 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU6-126P-201ENST00000516685 103 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 MIR4431-201ENST00000579990 94 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 FTX_2.1-201ENST00000618816 94 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 RNU6-888P-201ENST00000363010 101 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 Y_RNA.270-201ENST00000364693 104 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 SNORD24-201ENST00000383884 75 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 RNU6-1065P-201ENST00000384513 106 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 SNORD28B-201ENST00000390993 75 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.22□□□□□ -2.21
CLPTM1O96005 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
CLPTM1O96005 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
CLPTM1O96005 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
CLPTM1O96005 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CLPTM1O96005 Y_RNA.4-201ENST00000362333 112 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 SNORD115-28-201ENST00000363931 81 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 RNU6-1336P-201ENST00000383886 109 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 MIR570-201ENST00000384917 97 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 MT-TR-201ENST00000387439 65 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 U8.17-201ENST00000391292 132 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 PCNPP3-201ENST00000393579 471 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.21□□□□□ -2.22
CLPTM1O96005 MIR378D2-201ENST00000580636 98 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 MIR3129-201ENST00000581095 76 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
CLPTM1O96005 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLPTM1O96005 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 RNU6-978P-201ENST00000364371 103 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 AC107027.2-201ENST00000512197 115 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 RNU6-830P-201ENST00000516353 107 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 SNORD36C-201ENST00000516733 66 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 AC098479.1-201ENST00000609225 154 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 AC104465.1-201ENST00000611365 139 ntBASIC1.2□□□□□ -2.22
CLPTM1O96005 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CLPTM1O96005 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLPTM1O96005 Y_RNA.37-201ENST00000362606 108 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 RNU6-886P-201ENST00000384319 105 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 Y_RNA.521-201ENST00000384560 114 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CLPTM1O96005 RNU6-938P-201ENST00000411285 103 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.19□□□□□ -2.22
CLPTM1O96005 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.19□□□□□ -2.22
CLPTM1O96005 SNORD116-25-201ENST00000516517 92 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 MIR548AR-201ENST00000582191 57 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
CLPTM1O96005 RNU4-84P-201ENST00000364200 139 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 Y_RNA.241-201ENST00000364470 117 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 Y_RNA.357-201ENST00000365487 109 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 RNU6-768P-201ENST00000384683 107 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 AC009474.2-201ENST00000451383 136 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 RNU7-41P-201ENST00000515917 61 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR4764-201ENST00000580680 88 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR3192-201ENST00000584920 77 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR3658-201ENST00000636291 56 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 MIR376A2-201ENST00000636782 80 ntBASIC1.18□□□□□ -2.22
CLPTM1O96005 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLPTM1O96005 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 Y_RNA.441-201ENST00000384123 112 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 Y_RNA.494-201ENST00000384432 111 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CLPTM1O96005 SNORD77.3-201ENST00000391113 65 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
CLPTM1O96005 RNU6-1135P-201ENST00000411083 103 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.17□□□□□ -2.22
CLPTM1O96005 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 AP003484.1-201ENST00000530974 250 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 CYP3A52P-201ENST00000563326 91 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
CLPTM1O96005 Y_RNA.8-201ENST00000362353 102 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 Y_RNA.272-201ENST00000364696 102 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 RNU6-1130P-201ENST00000365434 107 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 Y_RNA.370-201ENST00000365589 108 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 RNU6-804P-201ENST00000384286 107 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 Y_RNA.555-201ENST00000384673 110 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 RNU6-239P-201ENST00000390990 99 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms