Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL596211.1-201ENST00000569873 2277 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 MIRLET7C-201ENST00000362160 84 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RNU6-414P-201ENST00000363705 104 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 Y_RNA.323-201ENST00000365157 109 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 SNORA51.5-201ENST00000384126 131 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CNOT4O95628 RNA5SP425-201ENST00000410336 112 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RPS12P2-201ENST00000439728 269 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 AC069257.2-201ENST00000441819 155 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RNU7-164P-201ENST00000459221 62 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 SNORA31.10-201ENST00000516482 106 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 SUMO2P16-201ENST00000519475 264 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 MIR4778-201ENST00000577635 80 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 MIR5094-201ENST00000578766 85 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 AC027279.3-201ENST00000625055 122 ntBASIC2.2□□□□□ -2.06
CNOT4O95628 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CNOT4O95628 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.19□□□□□ -2.06
CNOT4O95628 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CNOT4O95628 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CNOT4O95628 MIR6073-201ENST00000352083 89 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 MT-TI-201ENST00000387365 69 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CNOT4O95628 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 RNY4P30-201ENST00000410216 95 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.19□□□□□ -2.06
CNOT4O95628 RNU7-123P-201ENST00000515911 60 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 RNU6-830P-201ENST00000516353 107 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 MIR4305-201ENST00000583252 102 ntBASIC2.19□□□□□ -2.06
CNOT4O95628 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.19□□□□□ -2.06
CNOT4O95628 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
CNOT4O95628 RNA5SP289-201ENST00000362332 137 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 Y_RNA.369-201ENST00000365568 117 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 RNU6-1113P-201ENST00000384348 107 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 RN7SKP200-201ENST00000410564 320 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.18□□□□□ -2.06
CNOT4O95628 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.18□□□□□ -2.06
CNOT4O95628 HSPE1P9-201ENST00000440046 311 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 AL096840.1-201ENST00000603287 93 ntBASIC2.18□□□□□ -2.06
CNOT4O95628 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNOT4O95628 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CNOT4O95628 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNOT4O95628 Y_RNA.241-201ENST00000364470 117 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 Y_RNA.348-201ENST00000365403 103 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 RNU6-905P-201ENST00000384434 107 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 RNU6-950P-201ENST00000384651 107 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 AL034345.1-201ENST00000407768 123 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 SNX2P2-201ENST00000424553 323 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 MIR4648-201ENST00000580107 72 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 MIR1291-201ENST00000627649 87 ntBASIC2.17□□□□□ -2.06
CNOT4O95628 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNOT4O95628 MIR342-201ENST00000362212 99 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 RNU4-16P-201ENST00000364737 141 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 U8.6-201ENST00000364939 135 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 SNORA27-201ENST00000384323 126 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 RNU6-424P-201ENST00000384367 105 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 RNU2-7P-201ENST00000410794 178 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 AC015922.2-201ENST00000435593 184 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.16□□□□□ -2.06
CNOT4O95628 AC022523.2-201ENST00000561045 150 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 AC007336.1-201ENST00000576365 3828 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 MIR5009-201ENST00000578736 100 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 MIR3163-201ENST00000581592 73 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 AP001318.4-201ENST00000616637 121 ntBASIC2.16□□□□□ -2.06
CNOT4O95628 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CNOT4O95628 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
CNOT4O95628 RNU6-833P-201ENST00000363486 107 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 RNU6-640P-201ENST00000363693 105 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 SNORA63D-201ENST00000364359 132 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 RNU6-1104P-201ENST00000384723 104 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 MIR548D2-201ENST00000384955 97 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 RNA5SP181-201ENST00000410246 98 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 AL035398.1-201ENST00000430869 322 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 snoU13.23-201ENST00000458863 104 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 RNU2-35P-201ENST00000516446 142 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 RNA5SP402-201ENST00000517148 110 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 AC090821.2-201ENST00000523552 176 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 AC068339.1-201ENST00000526965 141 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 HSPE1P19-201ENST00000603327 295 ntBASIC2.15□□□□□ -2.07
CNOT4O95628 SNORD115-34-201ENST00000362441 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-12-201ENST00000362583 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-29-201ENST00000362834 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-9-201ENST00000362912 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-21-201ENST00000362963 81 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-14-201ENST00000363090 81 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-13-201ENST00000363358 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-41-201ENST00000363608 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-11-201ENST00000363616 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-5-201ENST00000363633 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-39-201ENST00000363694 82 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms