Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 MIR548X2-201ENST00000579776 100 ntBASIC1.97□□□□□ -2.09
RFPL3O75679 AL357312.1-201ENST00000603879 298 ntBASIC1.97□□□□□ -2.09
RFPL3O75679 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
RFPL3O75679 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFPL3O75679 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFPL3O75679 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
RFPL3O75679 Y_RNA.506-201ENST00000384494 102 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 SNORA40.5-201ENST00000391061 128 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 Y_RNA.584-201ENST00000391090 114 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 SNORA25.12-201ENST00000516202 82 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 MIR548AR-201ENST00000582191 57 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 AC131055.1-201ENST00000584626 316 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 AL161722.3-201ENST00000605789 2983 ntBASIC1.96□□□□□ -2.1
RFPL3O75679 MIR342-201ENST00000362212 99 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 RNU6-346P-201ENST00000516288 111 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 RNU7-43P-201ENST00000516554 64 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 Y_RNA.703-201ENST00000516846 111 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 MIR3133-201ENST00000583157 78 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 GHRLOS.1-201ENST00000610995 70 ntBASIC1.95□□□□□ -2.1
RFPL3O75679 RNU6-746P-201ENST00000384112 109 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 SNORA27-201ENST00000384323 126 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 AL627390.1-201ENST00000396055 340 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 RPL39P39-201ENST00000455840 151 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 RNU7-67P-201ENST00000459003 62 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.94□□□□□ -2.1
RFPL3O75679 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-34-201ENST00000362441 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-12-201ENST00000362583 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-29-201ENST00000362834 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-9-201ENST00000362912 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-21-201ENST00000362963 81 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-14-201ENST00000363090 81 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-13-201ENST00000363358 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-41-201ENST00000363608 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-11-201ENST00000363616 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-5-201ENST00000363633 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-39-201ENST00000363694 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-4-201ENST00000363810 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-16-201ENST00000363887 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-6-201ENST00000363942 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-42-201ENST00000364273 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-15-201ENST00000364809 81 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-1-201ENST00000364961 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-26-201ENST00000365067 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-10-201ENST00000365073 81 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 Y_RNA.351-201ENST00000365436 96 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-43-201ENST00000365503 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-36-201ENST00000365629 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 RNY1P5-201ENST00000383890 115 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORA70.7-201ENST00000384159 133 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 RNU1-78P-201ENST00000391248 165 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 MIR4764-201ENST00000580680 88 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 MIR5197-201ENST00000583721 112 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 SNORD115-40-201ENST00000606510 82 ntBASIC1.93□□□□□ -2.1
RFPL3O75679 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFPL3O75679 MIR302B-201ENST00000362188 73 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 Y_RNA.497-201ENST00000384447 98 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 MIR570-201ENST00000384917 97 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 SNORD28B-201ENST00000390993 75 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 AL603908.1-201ENST00000406098 201 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 RPS26P48-201ENST00000491713 339 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 SNORD111.1-201ENST00000516421 86 ntBASIC1.92□□□□□ -2.1
RFPL3O75679 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.92□□□□□ -2.1
RFPL3O75679 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
RFPL3O75679 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFPL3O75679 MTATP6P21-201ENST00000440681 189 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 AC027119.1-201ENST00000440877 241 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 RNU7-80P-201ENST00000459562 61 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 snoU13.31-201ENST00000607291 104 ntBASIC1.91□□□□□ -2.1
RFPL3O75679 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFPL3O75679 MTND5P32-201ENST00000560711 1802 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 Y_RNA.52-201ENST00000362760 96 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 Y_RNA.440-201ENST00000384120 114 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 Y_RNA.454-201ENST00000384224 113 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 SNORA51.10-201ENST00000384418 136 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 RNU6-125P-201ENST00000384505 107 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 SNORD41-201ENST00000386967 70 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 SUMO1P3-201ENST00000439961 304 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 RNU6-1149P-201ENST00000516810 97 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
RFPL3O75679 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 AC243994.1-201ENST00000618627 109 ntBASIC1.9□□□□□ -2.11
RFPL3O75679 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RFPL3O75679 RPS29P24-201ENST00000486345 171 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 RNA5SP445-201ENST00000515889 115 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms