Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPM3O75607 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPM3O75607 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPM3O75607 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPM3O75607 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPM3O75607 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
NPM3O75607 RNA5SP50-201ENST00000363731 107 ntBASIC4.57□□□□□ -1.68
NPM3O75607 SNORD45A-201ENST00000384512 84 ntBASIC4.57□□□□□ -1.68
NPM3O75607 RNU7-62P-201ENST00000458856 62 ntBASIC4.57□□□□□ -1.68
NPM3O75607 AC003982.1-202ENST00000469928 248 ntBASIC4.57□□□□□ -1.68
NPM3O75607 U4.3-201ENST00000621047 82 ntBASIC4.57□□□□□ -1.68
NPM3O75607 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.57□□□□□ -1.68
NPM3O75607 AC009093.8-201ENST00000641769 292 ntBASIC4.57□□□□□ -1.68
NPM3O75607 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.57□□□□□ -1.68
NPM3O75607 SNORA70.4-201ENST00000365509 134 ntBASIC4.56□□□□□ -1.68
NPM3O75607 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NPM3O75607 MIR3944-201ENST00000581277 108 ntBASIC4.56□□□□□ -1.68
NPM3O75607 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.56□□□□□ -1.68
NPM3O75607 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NPM3O75607 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPM3O75607 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NPM3O75607 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPM3O75607 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPM3O75607 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NPM3O75607 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPM3O75607 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPM3O75607 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPM3O75607 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPM3O75607 MIR7-3-201ENST00000384898 110 ntBASIC4.55□□□□□ -1.68
NPM3O75607 MT-TN-201ENST00000387400 73 ntBASIC4.55□□□□□ -1.68
NPM3O75607 EIF4BP1-201ENST00000554881 351 ntBASIC4.55□□□□□ -1.68
NPM3O75607 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.54□□□□□ -1.68
NPM3O75607 MIR208A-201ENST00000362287 71 ntBASIC4.54□□□□□ -1.68
NPM3O75607 SNORA63.1-201ENST00000362493 131 ntBASIC4.54□□□□□ -1.68
NPM3O75607 RNU6-1216P-201ENST00000362590 107 ntBASIC4.54□□□□□ -1.68
NPM3O75607 SNORD45.1-201ENST00000363181 77 ntBASIC4.54□□□□□ -1.68
NPM3O75607 GTF3AP2-201ENST00000557014 266 ntBASIC4.54□□□□□ -1.68
NPM3O75607 MIR4491-201ENST00000581087 68 ntBASIC4.54□□□□□ -1.68
NPM3O75607 TRDV1-202ENST00000621643 102 ntBASIC4.54□□□□□ -1.68
NPM3O75607 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPM3O75607 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPM3O75607 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
NPM3O75607 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.54□□□□□ -1.68
NPM3O75607 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.54□□□□□ -1.68
NPM3O75607 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
NPM3O75607 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPM3O75607 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPM3O75607 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NPM3O75607 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.53□□□□□ -1.68
NPM3O75607 MIR101-2-201ENST00000362195 79 ntBASIC4.53□□□□□ -1.68
NPM3O75607 RNA5SP146-201ENST00000410743 123 ntBASIC4.53□□□□□ -1.68
NPM3O75607 AC093578.1-201ENST00000415219 368 ntBASIC4.53□□□□□ -1.68
NPM3O75607 AL139132.1-201ENST00000431587 344 ntBASIC4.53□□□□□ -1.68
NPM3O75607 AC097510.1-201ENST00000510945 133 ntBASIC4.53□□□□□ -1.68
NPM3O75607 SNORA9.3-201ENST00000516383 129 ntBASIC4.53□□□□□ -1.68
NPM3O75607 MIR2115-201ENST00000516657 100 ntBASIC4.53□□□□□ -1.68
NPM3O75607 RNU11-2P-201ENST00000516898 142 ntBASIC4.53□□□□□ -1.68
NPM3O75607 MIR548H5-201ENST00000580314 60 ntBASIC4.53□□□□□ -1.68
NPM3O75607 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NPM3O75607 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
NPM3O75607 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPM3O75607 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NPM3O75607 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPM3O75607 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NPM3O75607 MIR519A1-201ENST00000385257 85 ntBASIC4.52□□□□□ -1.69
NPM3O75607 AL035423.1-201ENST00000420331 213 ntBASIC4.52□□□□□ -1.69
NPM3O75607 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.52□□□□□ -1.69
NPM3O75607 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.52□□□□□ -1.69
NPM3O75607 AP000942.3-201ENST00000603702 160 ntBASIC4.52□□□□□ -1.69
NPM3O75607 AC019176.2-201ENST00000611579 315 ntBASIC4.52□□□□□ -1.69
NPM3O75607 ZNF209P-201ENST00000593450 2304 ntBASIC4.52□□□□□ -1.69
NPM3O75607 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPM3O75607 RNU6-664P-201ENST00000362381 107 ntBASIC4.51□□□□□ -1.69
NPM3O75607 AC004965.1-201ENST00000413033 213 ntBASIC4.51□□□□□ -1.69
NPM3O75607 Z96811.1-201ENST00000445880 108 ntBASIC4.51□□□□□ -1.69
NPM3O75607 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.51□□□□□ -1.69
NPM3O75607 SNORA25.16-201ENST00000516741 121 ntBASIC4.51□□□□□ -1.69
NPM3O75607 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPM3O75607 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPM3O75607 SNORD46.1-201ENST00000364139 104 ntBASIC4.5□□□□□ -1.69
NPM3O75607 SNORD101-201ENST00000384027 73 ntBASIC4.5□□□□□ -1.69
NPM3O75607 Y_RNA.536-201ENST00000384621 113 ntBASIC4.5□□□□□ -1.69
NPM3O75607 SNORD100-201ENST00000408573 76 ntBASIC4.5□□□□□ -1.69
NPM3O75607 RNA5SP344-201ENST00000411081 104 ntBASIC4.5□□□□□ -1.69
NPM3O75607 PRSS3P4-201ENST00000453323 162 ntBASIC4.5□□□□□ -1.69
NPM3O75607 RNU7-195P-201ENST00000458793 62 ntBASIC4.5□□□□□ -1.69
NPM3O75607 AP004217.1-201ENST00000480579 346 ntBASIC4.5□□□□□ -1.69
NPM3O75607 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.5□□□□□ -1.69
NPM3O75607 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPM3O75607 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NPM3O75607 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NPM3O75607 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
NPM3O75607 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NPM3O75607 MIR337-201ENST00000362281 93 ntBASIC4.49□□□□□ -1.69
NPM3O75607 RNU6-669P-201ENST00000365575 107 ntBASIC4.49□□□□□ -1.69
NPM3O75607 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.49□□□□□ -1.69
NPM3O75607 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NPM3O75607 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.49□□□□□ -1.69
NPM3O75607 SNORD105B-201ENST00000458770 79 ntBASIC4.49□□□□□ -1.69
NPM3O75607 RPL30P7-201ENST00000479312 323 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms