Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
GPC4O75487 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
GPC4O75487 MIR4662B-201ENST00000579498 81 ntBASIC1.12□□□□□ -2.23
GPC4O75487 RNU2-4P-201ENST00000606190 192 ntBASIC1.12□□□□□ -2.23
GPC4O75487 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
GPC4O75487 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
GPC4O75487 MIR103A2-201ENST00000362154 78 ntBASIC1.11□□□□□ -2.23
GPC4O75487 Y_RNA.91-201ENST00000363042 107 ntBASIC1.11□□□□□ -2.23
GPC4O75487 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
GPC4O75487 MIR518F-201ENST00000384973 87 ntBASIC1.11□□□□□ -2.23
GPC4O75487 MIR616-201ENST00000385293 97 ntBASIC1.11□□□□□ -2.23
GPC4O75487 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.11□□□□□ -2.23
GPC4O75487 RNU2-13P-201ENST00000515909 113 ntBASIC1.11□□□□□ -2.23
GPC4O75487 RNU6-693P-201ENST00000516134 107 ntBASIC1.11□□□□□ -2.23
GPC4O75487 MIR4791-201ENST00000607666 84 ntBASIC1.11□□□□□ -2.23
GPC4O75487 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
GPC4O75487 Y_RNA.66-201ENST00000362862 102 ntBASIC1.1□□□□□ -2.23
GPC4O75487 RNY4P28-201ENST00000365281 93 ntBASIC1.1□□□□□ -2.23
GPC4O75487 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
GPC4O75487 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
GPC4O75487 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
GPC4O75487 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
GPC4O75487 RNU6-938P-201ENST00000411285 103 ntBASIC1.1□□□□□ -2.23
GPC4O75487 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
GPC4O75487 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
GPC4O75487 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
GPC4O75487 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
GPC4O75487 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.1□□□□□ -2.23
GPC4O75487 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
GPC4O75487 Y_RNA.676-201ENST00000516393 96 ntBASIC1.1□□□□□ -2.23
GPC4O75487 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
GPC4O75487 Y_RNA.20-201ENST00000362479 113 ntBASIC1.09□□□□□ -2.23
GPC4O75487 RNA5SP48-201ENST00000363969 126 ntBASIC1.09□□□□□ -2.23
GPC4O75487 Y_RNA.262-201ENST00000364641 102 ntBASIC1.09□□□□□ -2.23
GPC4O75487 Y_RNA.634-201ENST00000364811 113 ntBASIC1.09□□□□□ -2.23
GPC4O75487 Y_RNA.330-201ENST00000365230 109 ntBASIC1.09□□□□□ -2.23
GPC4O75487 RNU6-53P-201ENST00000365367 106 ntBASIC1.09□□□□□ -2.23
GPC4O75487 RNU4-17P-201ENST00000365598 141 ntBASIC1.09□□□□□ -2.23
GPC4O75487 SNORD58.1-201ENST00000391313 66 ntBASIC1.09□□□□□ -2.23
GPC4O75487 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
GPC4O75487 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
GPC4O75487 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
GPC4O75487 RNU6-1299P-201ENST00000516316 100 ntBASIC1.09□□□□□ -2.23
GPC4O75487 RNU6-365P-201ENST00000517113 106 ntBASIC1.09□□□□□ -2.23
GPC4O75487 AC109810.1-201ENST00000534066 224 ntBASIC1.09□□□□□ -2.23
GPC4O75487 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
GPC4O75487 MTND1P7-201ENST00000632801 297 ntBASIC1.09□□□□□ -2.23
GPC4O75487 SNORD115-28-201ENST00000363931 81 ntBASIC1.08□□□□□ -2.24
GPC4O75487 RNY3P5-201ENST00000384127 102 ntBASIC1.08□□□□□ -2.24
GPC4O75487 Y_RNA.537-201ENST00000384626 109 ntBASIC1.08□□□□□ -2.24
GPC4O75487 RNU2-70P-201ENST00000410718 179 ntBASIC1.08□□□□□ -2.24
GPC4O75487 RNU2-55P-201ENST00000411146 174 ntBASIC1.08□□□□□ -2.24
GPC4O75487 Y_RNA.626-201ENST00000411288 95 ntBASIC1.08□□□□□ -2.24
GPC4O75487 RNU6-1271P-201ENST00000517049 105 ntBASIC1.08□□□□□ -2.24
GPC4O75487 MIR548AO-201ENST00000579992 96 ntBASIC1.08□□□□□ -2.24
GPC4O75487 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
GPC4O75487 Y_RNA.37-201ENST00000362606 108 ntBASIC1.07□□□□□ -2.24
GPC4O75487 RNU6-888P-201ENST00000363010 101 ntBASIC1.07□□□□□ -2.24
GPC4O75487 SNORD45.3-201ENST00000363836 72 ntBASIC1.07□□□□□ -2.24
GPC4O75487 SNORA1.2-201ENST00000365189 134 ntBASIC1.07□□□□□ -2.24
GPC4O75487 SNORD24-201ENST00000383884 75 ntBASIC1.07□□□□□ -2.24
GPC4O75487 SNORA51.10-201ENST00000384418 136 ntBASIC1.07□□□□□ -2.24
GPC4O75487 RNU6-388P-201ENST00000517012 105 ntBASIC1.07□□□□□ -2.24
GPC4O75487 RNU6-389P-201ENST00000517048 105 ntBASIC1.07□□□□□ -2.24
GPC4O75487 SEPT14P17-201ENST00000617978 177 ntBASIC1.07□□□□□ -2.24
GPC4O75487 AC078938.1-201ENST00000620993 318 ntBASIC1.07□□□□□ -2.24
GPC4O75487 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.06□□□□□ -2.24
GPC4O75487 MIR342-201ENST00000362212 99 ntBASIC1.06□□□□□ -2.24
GPC4O75487 RNU6-654P-201ENST00000364373 107 ntBASIC1.06□□□□□ -2.24
GPC4O75487 Y_RNA.241-201ENST00000364470 117 ntBASIC1.06□□□□□ -2.24
GPC4O75487 Y_RNA.432-201ENST00000384087 111 ntBASIC1.06□□□□□ -2.24
GPC4O75487 RNU6-847P-201ENST00000411115 108 ntBASIC1.06□□□□□ -2.24
GPC4O75487 AF228730.3-201ENST00000436691 102 ntBASIC1.06□□□□□ -2.24
GPC4O75487 AL138752.1-201ENST00000452964 351 ntBASIC1.06□□□□□ -2.24
GPC4O75487 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
GPC4O75487 RNU6-1023P-201ENST00000516137 106 ntBASIC1.06□□□□□ -2.24
GPC4O75487 RNU6-504P-201ENST00000516568 104 ntBASIC1.06□□□□□ -2.24
GPC4O75487 SNORD36C-201ENST00000516733 66 ntBASIC1.06□□□□□ -2.24
GPC4O75487 AC022559.1-201ENST00000520905 205 ntBASIC1.06□□□□□ -2.24
GPC4O75487 AC023827.1-201ENST00000569247 97 ntBASIC1.06□□□□□ -2.24
GPC4O75487 MIR4308-201ENST00000580634 81 ntBASIC1.06□□□□□ -2.24
GPC4O75487 AC243994.1-201ENST00000618627 109 ntBASIC1.06□□□□□ -2.24
GPC4O75487 MIR6516-201ENST00000630554 81 ntBASIC1.06□□□□□ -2.24
GPC4O75487 Y_RNA.188-201ENST00000363952 111 ntBASIC1.05□□□□□ -2.24
GPC4O75487 RNU6-1067P-201ENST00000384752 107 ntBASIC1.05□□□□□ -2.24
GPC4O75487 AL121914.1-201ENST00000450188 156 ntBASIC1.05□□□□□ -2.24
GPC4O75487 SNORA18.4-201ENST00000516440 124 ntBASIC1.05□□□□□ -2.24
GPC4O75487 AC004817.2-201ENST00000561794 651 ntBASIC1.05□□□□□ -2.24
GPC4O75487 AC097639.2-201ENST00000603159 172 ntBASIC1.05□□□□□ -2.24
GPC4O75487 MIR8070-201ENST00000616510 88 ntBASIC1.05□□□□□ -2.24
GPC4O75487 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-34-201ENST00000362441 82 ntBASIC1.04□□□□□ -2.24
GPC4O75487 Y_RNA.23-201ENST00000362496 106 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-12-201ENST00000362583 82 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-29-201ENST00000362834 82 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-9-201ENST00000362912 82 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-21-201ENST00000362963 81 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-14-201ENST00000363090 81 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-13-201ENST00000363358 82 ntBASIC1.04□□□□□ -2.24
GPC4O75487 SNORD115-41-201ENST00000363608 82 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms