Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 SNORD115-1-201ENST00000364961 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-26-201ENST00000365067 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-10-201ENST00000365073 81 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-43-201ENST00000365503 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-36-201ENST00000365629 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 Y_RNA.440-201ENST00000384120 114 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORA40-201ENST00000388090 126 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORA74.3-201ENST00000517108 154 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 AC090821.2-201ENST00000523552 176 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 AP001328.1-201ENST00000528550 176 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-40-201ENST00000606510 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 MIR8063-201ENST00000621930 81 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 AP001340.1-201ENST00000624405 217 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 AC091895.1-201ENST00000624494 256 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
KDM1AO60341 MTND5P32-201ENST00000560711 1802 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 SNORA40.5-201ENST00000391061 128 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 AL451046.2-201ENST00000403074 277 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 MTATP6P21-201ENST00000440681 189 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 SCARNA15-202ENST00000516881 127 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 RNU6-789P-201ENST00000517105 102 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 RNU2-60P-201ENST00000517290 128 ntBASIC1.9□□□□□ -2.11
KDM1AO60341 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KDM1AO60341 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
KDM1AO60341 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KDM1AO60341 SNORD18B-201ENST00000365659 72 ntBASIC1.89□□□□□ -2.11
KDM1AO60341 Y_RNA.586-201ENST00000391146 98 ntBASIC1.89□□□□□ -2.11
KDM1AO60341 MTND4LP9-201ENST00000427694 174 ntBASIC1.89□□□□□ -2.11
KDM1AO60341 HSPE1P24-201ENST00000450782 238 ntBASIC1.89□□□□□ -2.11
KDM1AO60341 Y_RNA.686-201ENST00000516548 134 ntBASIC1.89□□□□□ -2.11
KDM1AO60341 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
KDM1AO60341 Y_RNA.370-201ENST00000365589 108 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 snoU13.26-201ENST00000459452 105 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 RNA5SP236-201ENST00000516169 116 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 RNU6-406P-201ENST00000516470 107 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 RNU7-43P-201ENST00000516554 64 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 RNU6-922P-201ENST00000516753 99 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 U7.2-201ENST00000607576 63 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
KDM1AO60341 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KDM1AO60341 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 SNORD28B-201ENST00000390993 75 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 AC107297.1-201ENST00000459991 176 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 RPS29P24-201ENST00000486345 171 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 RPS26P48-201ENST00000491713 339 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 MIR548AR-201ENST00000582191 57 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 AL513534.2-201ENST00000603836 250 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 TUG1_4.1-201ENST00000619464 181 ntBASIC1.87□□□□□ -2.11
KDM1AO60341 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KDM1AO60341 SNORA70.7-201ENST00000384159 133 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 AL603914.1-201ENST00000401964 204 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 snoU13.15-201ENST00000459407 104 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 RNU7-96P-201ENST00000459535 64 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 SNORD111.1-201ENST00000516421 86 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 Y_RNA.690-201ENST00000516603 95 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.86□□□□□ -2.11
KDM1AO60341 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
KDM1AO60341 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
KDM1AO60341 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
KDM1AO60341 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 Y_RNA.494-201ENST00000384432 111 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 RNU7-80P-201ENST00000459562 61 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 UBL5P3-201ENST00000475112 231 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 RNU6-998P-201ENST00000515894 101 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 RNU7-70P-201ENST00000516941 66 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
KDM1AO60341 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
KDM1AO60341 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.85□□□□□ -2.11
KDM1AO60341 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.84□□□□□ -2.11
KDM1AO60341 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 Y_RNA.454-201ENST00000384224 113 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 RNU2-13P-201ENST00000515909 113 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 Y_RNA.692-201ENST00000516627 105 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 Y_RNA.757-201ENST00000578934 114 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 MIR4764-201ENST00000580680 88 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 AL357312.1-201ENST00000603879 298 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 AC011603.4-201ENST00000611325 277 ntBASIC1.84□□□□□ -2.11
KDM1AO60341 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
KDM1AO60341 Y_RNA.351-201ENST00000365436 96 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 RNU6-81P-201ENST00000365608 104 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 RNU6-1067P-201ENST00000384752 107 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 MIR520C-201ENST00000385005 87 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 SNX2P2-201ENST00000424553 323 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
KDM1AO60341 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 AC091932.4-201ENST00000623386 200 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms