Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MTND1P7-201ENST00000632801 297 ntBASIC1.34□□□□□ -2.19
PRKNO60260 Y_RNA.66-201ENST00000362862 102 ntBASIC1.33□□□□□ -2.2
PRKNO60260 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
PRKNO60260 RNU6-187P-201ENST00000384139 106 ntBASIC1.33□□□□□ -2.2
PRKNO60260 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
PRKNO60260 MIR136-201ENST00000385207 82 ntBASIC1.33□□□□□ -2.2
PRKNO60260 RNU6-693P-201ENST00000516134 107 ntBASIC1.33□□□□□ -2.2
PRKNO60260 RNU6-346P-201ENST00000516288 111 ntBASIC1.33□□□□□ -2.2
PRKNO60260 RNU6-504P-201ENST00000516568 104 ntBASIC1.33□□□□□ -2.2
PRKNO60260 AL512598.1-201ENST00000610158 273 ntBASIC1.33□□□□□ -2.2
PRKNO60260 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
PRKNO60260 MIR3658-201ENST00000636291 56 ntBASIC1.33□□□□□ -2.2
PRKNO60260 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.33□□□□□ -2.2
PRKNO60260 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PRKNO60260 RNU6-818P-201ENST00000364837 108 ntBASIC1.32□□□□□ -2.2
PRKNO60260 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
PRKNO60260 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
PRKNO60260 RNU6-922P-201ENST00000516753 99 ntBASIC1.32□□□□□ -2.2
PRKNO60260 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
PRKNO60260 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
PRKNO60260 Y_RNA.778-201ENST00000620203 90 ntBASIC1.32□□□□□ -2.2
PRKNO60260 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PRKNO60260 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PRKNO60260 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
PRKNO60260 MIR302D-201ENST00000362275 68 ntBASIC1.31□□□□□ -2.2
PRKNO60260 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
PRKNO60260 RNU6-151P-201ENST00000364158 107 ntBASIC1.31□□□□□ -2.2
PRKNO60260 Y_RNA.337-201ENST00000365312 102 ntBASIC1.31□□□□□ -2.2
PRKNO60260 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
PRKNO60260 Y_RNA.547-201ENST00000384654 119 ntBASIC1.31□□□□□ -2.2
PRKNO60260 RNU6-768P-201ENST00000384683 107 ntBASIC1.31□□□□□ -2.2
PRKNO60260 MIR548A2-201ENST00000384956 97 ntBASIC1.31□□□□□ -2.2
PRKNO60260 RNU4-61P-201ENST00000411243 107 ntBASIC1.31□□□□□ -2.2
PRKNO60260 AC079140.2-201ENST00000506193 142 ntBASIC1.31□□□□□ -2.2
PRKNO60260 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
PRKNO60260 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
PRKNO60260 SNORD116-25-201ENST00000516517 92 ntBASIC1.31□□□□□ -2.2
PRKNO60260 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
PRKNO60260 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.31□□□□□ -2.2
PRKNO60260 MIR378D2-201ENST00000580636 98 ntBASIC1.31□□□□□ -2.2
PRKNO60260 DNAJC19P2-201ENST00000593340 302 ntBASIC1.31□□□□□ -2.2
PRKNO60260 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRKNO60260 RNU6-888P-201ENST00000363010 101 ntBASIC1.3□□□□□ -2.2
PRKNO60260 RNU6-978P-201ENST00000364371 103 ntBASIC1.3□□□□□ -2.2
PRKNO60260 RNU4-11P-201ENST00000365287 132 ntBASIC1.3□□□□□ -2.2
PRKNO60260 SNORD24-201ENST00000383884 75 ntBASIC1.3□□□□□ -2.2
PRKNO60260 Y_RNA.393-201ENST00000383936 102 ntBASIC1.3□□□□□ -2.2
PRKNO60260 Y_RNA.400-201ENST00000383963 111 ntBASIC1.3□□□□□ -2.2
PRKNO60260 MIR518F-201ENST00000384973 87 ntBASIC1.3□□□□□ -2.2
PRKNO60260 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
PRKNO60260 AC007751.1-201ENST00000529260 376 ntBASIC1.3□□□□□ -2.2
PRKNO60260 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
PRKNO60260 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
PRKNO60260 MIR8070-201ENST00000616510 88 ntBASIC1.3□□□□□ -2.2
PRKNO60260 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PRKNO60260 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
PRKNO60260 Y_RNA.118-201ENST00000363300 101 ntBASIC1.29□□□□□ -2.2
PRKNO60260 RNU6-597P-201ENST00000365620 102 ntBASIC1.29□□□□□ -2.2
PRKNO60260 Y_RNA.521-201ENST00000384560 114 ntBASIC1.29□□□□□ -2.2
PRKNO60260 MIR653-201ENST00000385279 96 ntBASIC1.29□□□□□ -2.2
PRKNO60260 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PRKNO60260 SNX2P2-201ENST00000424553 323 ntBASIC1.29□□□□□ -2.2
PRKNO60260 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.29□□□□□ -2.2
PRKNO60260 AL392103.1-201ENST00000447000 198 ntBASIC1.29□□□□□ -2.2
PRKNO60260 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.29□□□□□ -2.2
PRKNO60260 RNU7-181P-201ENST00000517234 74 ntBASIC1.29□□□□□ -2.2
PRKNO60260 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
PRKNO60260 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
PRKNO60260 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
PRKNO60260 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PRKNO60260 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
PRKNO60260 SNORD115-28-201ENST00000363931 81 ntBASIC1.28□□□□□ -2.2
PRKNO60260 Y_RNA.215-201ENST00000364204 112 ntBASIC1.28□□□□□ -2.2
PRKNO60260 SNORA1-201ENST00000384107 130 ntBASIC1.28□□□□□ -2.2
PRKNO60260 MIR499A-201ENST00000384903 122 ntBASIC1.28□□□□□ -2.2
PRKNO60260 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKNO60260 SNORD123-201ENST00000459473 70 ntBASIC1.28□□□□□ -2.2
PRKNO60260 RNU4-57P-201ENST00000515980 135 ntBASIC1.28□□□□□ -2.2
PRKNO60260 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.28□□□□□ -2.2
PRKNO60260 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
PRKNO60260 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
PRKNO60260 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
PRKNO60260 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRKNO60260 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
PRKNO60260 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
PRKNO60260 Y_RNA.488-201ENST00000384403 102 ntBASIC1.27□□□□□ -2.21
PRKNO60260 RNU6-1065P-201ENST00000384513 106 ntBASIC1.27□□□□□ -2.21
PRKNO60260 MIR569-201ENST00000385228 96 ntBASIC1.27□□□□□ -2.21
PRKNO60260 SNORD41-201ENST00000386967 70 ntBASIC1.27□□□□□ -2.21
PRKNO60260 SNORA75.5-201ENST00000391291 81 ntBASIC1.27□□□□□ -2.21
PRKNO60260 U8.17-201ENST00000391292 132 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AF228730.3-201ENST00000436691 102 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.27□□□□□ -2.21
PRKNO60260 RNU6-830P-201ENST00000516353 107 ntBASIC1.27□□□□□ -2.21
PRKNO60260 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
PRKNO60260 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
PRKNO60260 Y_RNA.37-201ENST00000362606 108 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms