Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR4762-201ENST00000585261 75 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 U1.36-201ENST00000620684 176 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
SMAD6O43541 RNU6-1084P-201ENST00000362498 107 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 Y_RNA.35-201ENST00000362601 101 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORD14E-201ENST00000364009 85 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORA22-201ENST00000383907 134 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR548A3-201ENST00000385297 97 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR548O-201ENST00000408583 114 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.74□□□□□ -2.13
SMAD6O43541 BX510359.4-201ENST00000423750 193 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 RNU7-25P-201ENST00000516544 62 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AC025166.1-201ENST00000612411 163 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AL121890.5-201ENST00000620848 304 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 ICE2P2-201ENST00000483823 2787 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SMAD6O43541 RNU1-58P-201ENST00000362413 163 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-268P-201ENST00000364174 107 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 snoU2-30.1-201ENST00000365012 70 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNORD116-21-201ENST00000384507 92 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR1263-201ENST00000408324 86 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
SMAD6O43541 AC063976.4-201ENST00000421971 163 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNRPGP14-201ENST00000435400 219 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 CYCTP-201ENST00000504253 315 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-237P-201ENST00000515985 71 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNORD45.4-201ENST00000516629 73 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR5197-201ENST00000583721 112 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 AC006441.5-201ENST00000612680 209 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MTND5P18-201ENST00000445624 1801 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-755P-201ENST00000364400 103 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 SNORA17.3-201ENST00000391159 129 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 RNA5SP482-201ENST00000391269 118 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
SMAD6O43541 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.649-201ENST00000459077 103 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.72□□□□□ -2.13
SMAD6O43541 AC084364.2-201ENST00000546924 395 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 AC005786.1-201ENST00000588553 154 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.72□□□□□ -2.13
SMAD6O43541 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMAD6O43541 MIR597-201ENST00000384968 97 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 MIR548A1-201ENST00000385041 97 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-482P-201ENST00000391068 107 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 CALM2P4-201ENST00000430810 426 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-1116P-201ENST00000517269 99 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
SMAD6O43541 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.71□□□□□ -2.14
SMAD6O43541 MIR5094-201ENST00000578766 85 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 AC134878.1-201ENST00000619901 243 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMAD6O43541 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.7□□□□□ -2.14
SMAD6O43541 Y_RNA.37-201ENST00000362606 108 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORA2.2-201ENST00000365473 135 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 Y_RNA.366-201ENST00000365540 102 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-1189P-201ENST00000383958 107 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-938P-201ENST00000411285 103 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORA31.10-201ENST00000516482 106 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-113P-201ENST00000516653 101 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORD36C-201ENST00000516733 66 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR3613-201ENST00000579844 87 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMAD6O43541 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMAD6O43541 SNORD115-28-201ENST00000363931 81 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-1019P-201ENST00000364424 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.336-201ENST00000365307 109 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-147P-201ENST00000383983 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.410-201ENST00000383992 113 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-880P-201ENST00000384526 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.528-201ENST00000384575 108 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms