Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 MRPS18CP4-201ENST00000535821 231 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 AP001485.1-201ENST00000604799 199 ntBASIC1.67□□□□□ -2.14
PRPF3O43395 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.67□□□□□ -2.14
PRPF3O43395 Y_RNA.66-201ENST00000362862 102 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 RNA5SP48-201ENST00000363969 126 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 SNORD61-201ENST00000384252 73 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 Y_RNA.547-201ENST00000384654 119 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 MIR518E-201ENST00000385252 88 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 AC107297.1-201ENST00000459991 176 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 AC005840.1-201ENST00000498412 377 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 SNORA31.4-201ENST00000516049 129 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 RNU6-1270P-201ENST00000517128 108 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 AC004792.1-201ENST00000614523 137 ntBASIC1.66□□□□□ -2.14
PRPF3O43395 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
PRPF3O43395 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
PRPF3O43395 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.65□□□□□ -2.15
PRPF3O43395 RNU6-182P-201ENST00000516970 105 ntBASIC1.65□□□□□ -2.15
PRPF3O43395 DNAJC19P9-201ENST00000555084 351 ntBASIC1.65□□□□□ -2.15
PRPF3O43395 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.65□□□□□ -2.15
PRPF3O43395 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PRPF3O43395 RNU6-888P-201ENST00000363010 101 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 RNU6-643P-201ENST00000384018 107 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 MIR518F-201ENST00000384973 87 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 U8.17-201ENST00000391292 132 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 AL133373.1-201ENST00000497098 94 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 RNU6-861P-201ENST00000516745 106 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 AC007751.1-201ENST00000529260 376 ntBASIC1.64□□□□□ -2.15
PRPF3O43395 Y_RNA.23-201ENST00000362496 106 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 RNU6-312P-201ENST00000364629 107 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 MIR548A2-201ENST00000384956 97 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 RNU4-57P-201ENST00000515980 135 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 CYP3A52P-201ENST00000563326 91 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 MIR4764-201ENST00000580680 88 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
PRPF3O43395 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PRPF3O43395 Y_RNA.116-201ENST00000363292 103 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 SNORD115-28-201ENST00000363931 81 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 Y_RNA.355-201ENST00000365462 98 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 SNORD26-201ENST00000384147 75 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 SNORA70.7-201ENST00000384159 133 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 Y_RNA.537-201ENST00000384626 109 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 AC006461.1-201ENST00000412637 326 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.62□□□□□ -2.15
PRPF3O43395 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
PRPF3O43395 RNU6-947P-201ENST00000516264 106 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 RNU7-181P-201ENST00000517234 74 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 MIR4431-201ENST00000579990 94 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 MIR378D2-201ENST00000580636 98 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 MIR3668-201ENST00000582138 75 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 AC134878.1-201ENST00000619901 243 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
PRPF3O43395 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
PRPF3O43395 RNU6-682P-201ENST00000363843 106 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 Y_RNA.240-201ENST00000364469 95 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 Y_RNA.410-201ENST00000383992 113 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PRPF3O43395 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
PRPF3O43395 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.61□□□□□ -2.15
PRPF3O43395 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
PRPF3O43395 SEPT7P4-201ENST00000437076 306 ntBASIC1.6□□□□□ -2.15
PRPF3O43395 Y_RNA.662-201ENST00000516028 97 ntBASIC1.6□□□□□ -2.15
PRPF3O43395 SNORD116-25-201ENST00000516517 92 ntBASIC1.6□□□□□ -2.15
PRPF3O43395 SNORD115-34-201ENST00000362441 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-12-201ENST00000362583 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 Y_RNA.37-201ENST00000362606 108 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-29-201ENST00000362834 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-9-201ENST00000362912 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-21-201ENST00000362963 81 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-14-201ENST00000363090 81 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-13-201ENST00000363358 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-41-201ENST00000363608 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-11-201ENST00000363616 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-5-201ENST00000363633 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-39-201ENST00000363694 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-4-201ENST00000363810 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-16-201ENST00000363887 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-6-201ENST00000363942 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-42-201ENST00000364273 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-15-201ENST00000364809 81 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-1-201ENST00000364961 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-26-201ENST00000365067 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-10-201ENST00000365073 81 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-43-201ENST00000365503 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-36-201ENST00000365629 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 Y_RNA.542-201ENST00000384641 111 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD28B-201ENST00000390993 75 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD12-201ENST00000391002 90 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 AC245047.7-201ENST00000440265 293 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 snoU13.18-201ENST00000459483 104 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 RNU11-2P-201ENST00000516898 142 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 SNORD115-40-201ENST00000606510 82 ntBASIC1.59□□□□□ -2.15
PRPF3O43395 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms