Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU6-985P-201ENST00000410182 104 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MTATP8P1-201ENST00000467115 207 ntBASIC0.57□□□□□ -2.32
MSH4O15457 Y_RNA.666-201ENST00000516187 112 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU7-25P-201ENST00000516544 62 ntBASIC0.57□□□□□ -2.32
MSH4O15457 SNORA27.4-201ENST00000516650 95 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR2115-201ENST00000516657 100 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU7-149P-201ENST00000516739 59 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
MSH4O15457 AC037487.3-201ENST00000606668 112 ntBASIC0.57□□□□□ -2.32
MSH4O15457 AC022140.2-201ENST00000623500 188 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR367-201ENST00000362299 68 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.24-201ENST00000362508 103 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-238P-201ENST00000363313 106 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-144P-201ENST00000383951 107 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.494-201ENST00000384432 111 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.587-201ENST00000391210 103 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-651P-201ENST00000411040 105 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
MSH4O15457 RNU4-57P-201ENST00000515980 135 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-1338P-201ENST00000516328 91 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.56□□□□□ -2.32
MSH4O15457 MIR4724-201ENST00000579485 89 ntBASIC0.56□□□□□ -2.32
MSH4O15457 MIR548AO-201ENST00000579992 96 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC044792.1-201ENST00000593294 196 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC006441.5-201ENST00000612680 209 ntBASIC0.56□□□□□ -2.32
MSH4O15457 uc_338.4-201ENST00000616635 176 ntBASIC0.56□□□□□ -2.32
MSH4O15457 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.152-201ENST00000363578 100 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.217-201ENST00000364214 105 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-639P-201ENST00000384074 107 ntBASIC0.55□□□□□ -2.32
MSH4O15457 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.547-201ENST00000384654 119 ntBASIC0.55□□□□□ -2.32
MSH4O15457 MIR548O-201ENST00000408583 114 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-1203P-201ENST00000410703 110 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AL731563.1-201ENST00000442202 214 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC023449.1-201ENST00000454464 154 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.641-201ENST00000459414 105 ntBASIC0.55□□□□□ -2.32
MSH4O15457 SERF1AP1-201ENST00000514575 187 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-1007P-201ENST00000516586 107 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AP003072.1-201ENST00000531740 145 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.55□□□□□ -2.32
MSH4O15457 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
MSH4O15457 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
MSH4O15457 MTND1P7-201ENST00000632801 297 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.276-201ENST00000364732 109 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-1227P-201ENST00000383981 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-211P-201ENST00000384047 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 Y_RNA.486-201ENST00000384398 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-1289P-201ENST00000384431 106 ntBASIC0.54□□□□□ -2.32
MSH4O15457 MIR1827-201ENST00000408549 66 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-635P-201ENST00000516651 102 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.54□□□□□ -2.32
MSH4O15457 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AC006006.1-201ENST00000603082 144 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AL021707.8-201ENST00000609428 183 ntBASIC0.54□□□□□ -2.32
MSH4O15457 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
MSH4O15457 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
MSH4O15457 MIR1-1-201ENST00000362147 71 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.237-201ENST00000364439 102 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.376-201ENST00000365638 108 ntBASIC0.53□□□□□ -2.32
MSH4O15457 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.537-201ENST00000384626 109 ntBASIC0.53□□□□□ -2.32
MSH4O15457 SNORD105-201ENST00000386910 85 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-1109P-201ENST00000391187 107 ntBASIC0.53□□□□□ -2.32
MSH4O15457 MTCO2P24-201ENST00000515611 426 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-1143P-201ENST00000516125 104 ntBASIC0.53□□□□□ -2.32
MSH4O15457 AC007751.1-201ENST00000529260 376 ntBASIC0.53□□□□□ -2.32
MSH4O15457 AP001282.2-201ENST00000616149 309 ntBASIC0.53□□□□□ -2.32
MSH4O15457 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.168-201ENST00000363740 102 ntBASIC0.52□□□□□ -2.33
MSH4O15457 Y_RNA.242-201ENST00000364473 110 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNU6-740P-201ENST00000364734 105 ntBASIC0.52□□□□□ -2.33
MSH4O15457 SNORA1.2-201ENST00000365189 134 ntBASIC0.52□□□□□ -2.33
MSH4O15457 MT-TT-201ENST00000387460 66 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNU6-205P-201ENST00000390858 107 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNA5SP496-201ENST00000391240 109 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
MSH4O15457 snoU13.21-201ENST00000459368 105 ntBASIC0.52□□□□□ -2.33
MSH4O15457 TRBVB-201ENST00000477100 408 ntBASIC0.52□□□□□ -2.33
MSH4O15457 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
MSH4O15457 Y_RNA.802-201ENST00000614892 130 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC243994.1-201ENST00000618627 109 ntBASIC0.52□□□□□ -2.33
MSH4O15457 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
MSH4O15457 UBE2WP1-201ENST00000362030 340 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.205-201ENST00000364128 113 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.241-201ENST00000364470 117 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.275-201ENST00000364726 110 ntBASIC0.51□□□□□ -2.33
MSH4O15457 MT-TW-201ENST00000387382 68 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC015818.7-201ENST00000428754 109 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC087499.7-201ENST00000441958 109 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms