Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.15□□□□□ -2.43
LSM1O15116 RNU4-80P-201ENST00000363200 141 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 MIR548A2-201ENST00000384956 97 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.16□□□□□ -2.44
LSM1O15116 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 AL512326.2-201ENST00000426359 151 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.16□□□□□ -2.44
LSM1O15116 AL160004.2-201ENST00000432935 350 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 MTND1P34-201ENST00000438556 671 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 FGF7P6-202ENST00000451282 293 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 RPS29P24-201ENST00000486345 171 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 RNU6-848P-201ENST00000515948 107 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 RNU6-617P-201ENST00000516147 107 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 RNU6-473P-201ENST00000516164 107 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 AL121655.1-201ENST00000605811 308 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 AC099654.14-201ENST00000638599 341 ntBASIC-0.16□□□□□ -2.44
LSM1O15116 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 SNORA1.1-201ENST00000364671 133 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 SNORD81.2-201ENST00000365153 76 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 RNU6-144P-201ENST00000383951 107 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 SNORA27-201ENST00000384323 126 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 MIR644A-201ENST00000385262 94 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 PCNPP3-201ENST00000393579 471 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 RNU4-30P-201ENST00000410245 143 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 MTCO1P5-201ENST00000433573 344 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 AC069271.1-201ENST00000445577 156 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 RNU2-31P-201ENST00000516954 155 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.17□□□□□ -2.44
LSM1O15116 RNU6-899P-201ENST00000363947 107 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 SNORD12C-201ENST00000386307 89 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 RNU6-308P-201ENST00000390957 107 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
LSM1O15116 AC141557.1-201ENST00000540982 400 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 AC025253.1-201ENST00000613623 543 ntBASIC-0.18□□□□□ -2.44
LSM1O15116 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 RNU6-937P-201ENST00000384325 106 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 RNA5SP496-201ENST00000391240 109 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 SNORD77.4-201ENST00000516158 81 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 RNU6-191P-201ENST00000516295 94 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 uc_338.22-201ENST00000622722 187 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 AC073869.6-201ENST00000640656 341 ntBASIC-0.19□□□□□ -2.44
LSM1O15116 SNORD114-5-201ENST00000362928 70 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 SNORD114-26-201ENST00000363543 72 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 RNU6-127P-201ENST00000390897 107 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 MIR548H2-201ENST00000408874 88 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 MTATP6P26-201ENST00000445926 662 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.2□□□□□ -2.44
LSM1O15116 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
LSM1O15116 AC113139.1-201ENST00000605049 239 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 AC133104.2-201ENST00000615272 193 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.2□□□□□ -2.44
LSM1O15116 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 SNORD24-201ENST00000383884 75 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 MIR1197-201ENST00000408818 88 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 AC023449.1-201ENST00000454464 154 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 RNU6-559P-201ENST00000516151 98 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 SNORD36C-201ENST00000516733 66 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 AC122108.2-201ENST00000611946 526 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 AC092794.1-201ENST00000612734 582 ntBASIC-0.21□□□□□ -2.44
LSM1O15116 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 SNORD116-29-201ENST00000384516 83 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 RNU6-21P-201ENST00000384710 107 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 SNORA26.6-201ENST00000391256 115 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 POLR2KP2-201ENST00000438155 177 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 RNU6-998P-201ENST00000515894 101 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 RNU6-469P-201ENST00000516253 101 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 RNA5SP47-201ENST00000517230 109 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 MIR4662B-201ENST00000579498 81 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
LSM1O15116 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU6-716P-201ENST00000365621 103 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU6-187P-201ENST00000384139 106 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU6-763P-201ENST00000390865 106 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 SNORD77.3-201ENST00000391113 65 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 MIR548I3-201ENST00000408378 149 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU4-83P-201ENST00000410863 133 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU6-383P-201ENST00000410864 94 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 RNU7-96P-201ENST00000459535 64 ntBASIC-0.23□□□□□ -2.45
LSM1O15116 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNY3-201ENST00000365484 102 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms