Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
CUX2O14529 AC090971.5-201ENST00000621102 293 ntBASIC0.51□□□□□ -2.33
CUX2O14529 SNORD113-8-201ENST00000363497 74 ntBASIC0.5□□□□□ -2.33
CUX2O14529 MIR1302-11-201ENST00000408051 138 ntBASIC0.5□□□□□ -2.33
CUX2O14529 MIR1302-9-201ENST00000408365 138 ntBASIC0.5□□□□□ -2.33
CUX2O14529 MIR1302-10-201ENST00000408734 138 ntBASIC0.5□□□□□ -2.33
CUX2O14529 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.5□□□□□ -2.33
CUX2O14529 RNU6-958P-201ENST00000516995 106 ntBASIC0.5□□□□□ -2.33
CUX2O14529 AP001180.6-201ENST00000584918 159 ntBASIC0.5□□□□□ -2.33
CUX2O14529 MIR1302-2-201ENST00000607096 138 ntBASIC0.5□□□□□ -2.33
CUX2O14529 Y_RNA.14-201ENST00000362415 103 ntBASIC0.49□□□□□ -2.33
CUX2O14529 RNU6-1205P-201ENST00000363625 106 ntBASIC0.49□□□□□ -2.33
CUX2O14529 Y_RNA.286-201ENST00000364813 102 ntBASIC0.49□□□□□ -2.33
CUX2O14529 RNU6-580P-201ENST00000365159 107 ntBASIC0.49□□□□□ -2.33
CUX2O14529 RNU6-1283P-201ENST00000365314 105 ntBASIC0.49□□□□□ -2.33
CUX2O14529 SNORA26.5-201ENST00000391215 123 ntBASIC0.49□□□□□ -2.33
CUX2O14529 AL603910.2-201ENST00000407268 136 ntBASIC0.49□□□□□ -2.33
CUX2O14529 RNU6-507P-201ENST00000516045 100 ntBASIC0.49□□□□□ -2.33
CUX2O14529 RNU6-764P-201ENST00000516396 105 ntBASIC0.49□□□□□ -2.33
CUX2O14529 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.49□□□□□ -2.33
CUX2O14529 Y_RNA.813-201ENST00000364639 102 ntBASIC0.48□□□□□ -2.33
CUX2O14529 Y_RNA.569-201ENST00000384749 103 ntBASIC0.48□□□□□ -2.33
CUX2O14529 RNU6-1237P-201ENST00000384777 107 ntBASIC0.48□□□□□ -2.33
CUX2O14529 MT-TN-201ENST00000387400 73 ntBASIC0.48□□□□□ -2.33
CUX2O14529 Y_RNA.602-201ENST00000410535 92 ntBASIC0.48□□□□□ -2.33
CUX2O14529 SNORD11-201ENST00000459124 84 ntBASIC0.48□□□□□ -2.33
CUX2O14529 RNU6-191P-201ENST00000516295 94 ntBASIC0.48□□□□□ -2.33
CUX2O14529 RNU6-1046P-201ENST00000516538 107 ntBASIC0.48□□□□□ -2.33
CUX2O14529 AC124312.5-201ENST00000604451 268 ntBASIC0.48□□□□□ -2.33
CUX2O14529 AC022140.2-201ENST00000623500 188 ntBASIC0.48□□□□□ -2.33
CUX2O14529 AC112487.2-201ENST00000637950 304 ntBASIC0.48□□□□□ -2.33
CUX2O14529 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.48□□□□□ -2.33
CUX2O14529 Y_RNA.222-201ENST00000364264 102 ntBASIC0.48□□□□□ -2.33
CUX2O14529 MIR520F-201ENST00000384824 87 ntBASIC0.48□□□□□ -2.33
CUX2O14529 snoU13.16-201ENST00000459350 104 ntBASIC0.48□□□□□ -2.33
CUX2O14529 RNU2-13P-201ENST00000515909 113 ntBASIC0.48□□□□□ -2.33
CUX2O14529 AL355297.3-201ENST00000604082 446 ntBASIC0.48□□□□□ -2.33
CUX2O14529 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CUX2O14529 Y_RNA.315-201ENST00000365117 102 ntBASIC0.47□□□□□ -2.33
CUX2O14529 Y_RNA.547-201ENST00000384654 119 ntBASIC0.47□□□□□ -2.33
CUX2O14529 SNORD38B-201ENST00000384690 67 ntBASIC0.47□□□□□ -2.33
CUX2O14529 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.47□□□□□ -2.33
CUX2O14529 RNU6-475P-201ENST00000516073 104 ntBASIC0.47□□□□□ -2.33
CUX2O14529 MIR4795-201ENST00000584182 89 ntBASIC0.47□□□□□ -2.33
CUX2O14529 AC005357.1-201ENST00000588399 301 ntBASIC0.47□□□□□ -2.33
CUX2O14529 AC007485.1-201ENST00000616755 206 ntBASIC0.47□□□□□ -2.33
CUX2O14529 SNORD38B-202ENST00000625943 69 ntBASIC0.47□□□□□ -2.33
CUX2O14529 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
CUX2O14529 RNA5SP496-201ENST00000391240 109 ntBASIC0.46□□□□□ -2.34
CUX2O14529 RNU6-383P-201ENST00000410864 94 ntBASIC0.46□□□□□ -2.34
CUX2O14529 RNU6-130P-201ENST00000411112 103 ntBASIC0.46□□□□□ -2.34
CUX2O14529 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.46□□□□□ -2.34
CUX2O14529 MRPS35P2-201ENST00000508242 191 ntBASIC0.46□□□□□ -2.34
CUX2O14529 MTND3P22-201ENST00000510932 243 ntBASIC0.46□□□□□ -2.34
CUX2O14529 RNU7-149P-201ENST00000516739 59 ntBASIC0.46□□□□□ -2.34
CUX2O14529 MIR5692C2-201ENST00000577959 77 ntBASIC0.46□□□□□ -2.34
CUX2O14529 RNU4-90P-201ENST00000362773 141 ntBASIC0.45□□□□□ -2.34
CUX2O14529 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
CUX2O14529 Y_RNA.241-201ENST00000364470 117 ntBASIC0.45□□□□□ -2.34
CUX2O14529 SNORA63.7-201ENST00000365579 123 ntBASIC0.45□□□□□ -2.34
CUX2O14529 RNU6-125P-201ENST00000384505 107 ntBASIC0.45□□□□□ -2.34
CUX2O14529 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CUX2O14529 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.45□□□□□ -2.34
CUX2O14529 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.45□□□□□ -2.34
CUX2O14529 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.45□□□□□ -2.34
CUX2O14529 MIR4264-201ENST00000583520 66 ntBASIC0.45□□□□□ -2.34
CUX2O14529 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.45□□□□□ -2.34
CUX2O14529 PART1_1.1-201ENST00000611761 217 ntBASIC0.45□□□□□ -2.34
CUX2O14529 MIR376A1-201ENST00000616574 68 ntBASIC0.45□□□□□ -2.34
CUX2O14529 AC013791.1-201ENST00000616619 62 ntBASIC0.45□□□□□ -2.34
CUX2O14529 AC090574.1-201ENST00000623186 233 ntBASIC0.45□□□□□ -2.34
CUX2O14529 Y_RNA.293-201ENST00000364908 93 ntBASIC0.44□□□□□ -2.34
CUX2O14529 Y_RNA.445-201ENST00000384168 102 ntBASIC0.44□□□□□ -2.34
CUX2O14529 RNU6-763P-201ENST00000390865 106 ntBASIC0.44□□□□□ -2.34
CUX2O14529 RNU6-308P-201ENST00000390957 107 ntBASIC0.44□□□□□ -2.34
CUX2O14529 MIR548O-201ENST00000408583 114 ntBASIC0.44□□□□□ -2.34
CUX2O14529 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
CUX2O14529 snoU13.21-201ENST00000459368 105 ntBASIC0.44□□□□□ -2.34
CUX2O14529 Y_RNA.702-201ENST00000516843 96 ntBASIC0.44□□□□□ -2.34
CUX2O14529 MIR548S-201ENST00000581352 82 ntBASIC0.44□□□□□ -2.34
CUX2O14529 AL049861.1-201ENST00000603130 150 ntBASIC0.44□□□□□ -2.34
CUX2O14529 AL162730.1-201ENST00000605734 292 ntBASIC0.44□□□□□ -2.34
CUX2O14529 Y_RNA.35-201ENST00000362601 101 ntBASIC0.43□□□□□ -2.34
CUX2O14529 Y_RNA.494-201ENST00000384432 111 ntBASIC0.43□□□□□ -2.34
CUX2O14529 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
CUX2O14529 SNORD115-46-201ENST00000390982 71 ntBASIC0.43□□□□□ -2.34
CUX2O14529 RNU6-101P-201ENST00000410323 104 ntBASIC0.43□□□□□ -2.34
CUX2O14529 SNX3P1X-201ENST00000414887 175 ntBASIC0.43□□□□□ -2.34
CUX2O14529 RNU6-693P-201ENST00000516134 107 ntBASIC0.43□□□□□ -2.34
CUX2O14529 Y_RNA.666-201ENST00000516187 112 ntBASIC0.43□□□□□ -2.34
CUX2O14529 RNU6-397P-201ENST00000516226 104 ntBASIC0.43□□□□□ -2.34
CUX2O14529 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.43□□□□□ -2.34
CUX2O14529 MIR4724-201ENST00000579485 89 ntBASIC0.43□□□□□ -2.34
CUX2O14529 LARP7P1-201ENST00000605576 316 ntBASIC0.43□□□□□ -2.34
CUX2O14529 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.43□□□□□ -2.34
CUX2O14529 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
CUX2O14529 SNORA40.5-201ENST00000391061 128 ntBASIC0.42□□□□□ -2.34
CUX2O14529 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.42□□□□□ -2.34
CUX2O14529 RNU7-25P-201ENST00000516544 62 ntBASIC0.42□□□□□ -2.34
CUX2O14529 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms