Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 MIR3910-1-201ENST00000580936 111 ntBASIC2□□□□□ -2.09
CBX4O00257 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
CBX4O00257 MIR8063-201ENST00000621930 81 ntBASIC2□□□□□ -2.09
CBX4O00257 AP001340.1-201ENST00000624405 217 ntBASIC2□□□□□ -2.09
CBX4O00257 SNORA40.5-201ENST00000391061 128 ntBASIC1.99□□□□□ -2.09
CBX4O00257 AL627390.1-201ENST00000396055 340 ntBASIC1.99□□□□□ -2.09
CBX4O00257 AL451046.2-201ENST00000403074 277 ntBASIC1.99□□□□□ -2.09
CBX4O00257 RNU6-938P-201ENST00000411285 103 ntBASIC1.99□□□□□ -2.09
CBX4O00257 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CBX4O00257 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.99□□□□□ -2.09
CBX4O00257 AL096840.1-201ENST00000603287 93 ntBASIC1.99□□□□□ -2.09
CBX4O00257 TUG1_4.1-201ENST00000619464 181 ntBASIC1.99□□□□□ -2.09
CBX4O00257 MIR7111-201ENST00000619751 72 ntBASIC1.99□□□□□ -2.09
CBX4O00257 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.99□□□□□ -2.09
CBX4O00257 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.99□□□□□ -2.09
CBX4O00257 WWP1P1-201ENST00000466609 2769 ntBASIC1.99□□□□□ -2.09
CBX4O00257 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
CBX4O00257 AP000648.3-201ENST00000623539 4507 ntBASIC1.99□□□□□ -2.09
CBX4O00257 MTND5P32-201ENST00000560711 1802 ntBASIC1.98□□□□□ -2.09
CBX4O00257 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-34-201ENST00000362441 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-12-201ENST00000362583 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-29-201ENST00000362834 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-9-201ENST00000362912 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-21-201ENST00000362963 81 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-14-201ENST00000363090 81 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-13-201ENST00000363358 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-41-201ENST00000363608 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-11-201ENST00000363616 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-5-201ENST00000363633 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-39-201ENST00000363694 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 RNY1P11-201ENST00000363759 113 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-4-201ENST00000363810 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-16-201ENST00000363887 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-6-201ENST00000363942 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-42-201ENST00000364273 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-15-201ENST00000364809 81 ntBASIC1.98□□□□□ -2.09
CBX4O00257 RNU6-915P-201ENST00000364943 103 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-1-201ENST00000364961 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-26-201ENST00000365067 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-10-201ENST00000365073 81 ntBASIC1.98□□□□□ -2.09
CBX4O00257 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-43-201ENST00000365503 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-36-201ENST00000365629 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 RNU6-1067P-201ENST00000384752 107 ntBASIC1.98□□□□□ -2.09
CBX4O00257 SNORA17.3-201ENST00000391159 129 ntBASIC1.98□□□□□ -2.09
CBX4O00257 AL445685.2-201ENST00000422551 342 ntBASIC1.98□□□□□ -2.09
CBX4O00257 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
CBX4O00257 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
CBX4O00257 RNU6-1149P-201ENST00000516810 97 ntBASIC1.98□□□□□ -2.09
CBX4O00257 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
CBX4O00257 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.98□□□□□ -2.09
CBX4O00257 SNORD115-40-201ENST00000606510 82 ntBASIC1.98□□□□□ -2.09
CBX4O00257 AC132825.6-201ENST00000638861 357 ntBASIC1.98□□□□□ -2.09
CBX4O00257 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
CBX4O00257 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CBX4O00257 U8.1-201ENST00000362843 134 ntBASIC1.97□□□□□ -2.09
CBX4O00257 Y_RNA.370-201ENST00000365589 108 ntBASIC1.97□□□□□ -2.09
CBX4O00257 Y_RNA.440-201ENST00000384120 114 ntBASIC1.97□□□□□ -2.09
CBX4O00257 SNORA27-201ENST00000384323 126 ntBASIC1.97□□□□□ -2.09
CBX4O00257 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
CBX4O00257 RNU6-257P-201ENST00000410238 98 ntBASIC1.97□□□□□ -2.09
CBX4O00257 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
CBX4O00257 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
CBX4O00257 HSPE1P24-201ENST00000450782 238 ntBASIC1.97□□□□□ -2.09
CBX4O00257 SNORA74.3-201ENST00000517108 154 ntBASIC1.97□□□□□ -2.09
CBX4O00257 AC090821.2-201ENST00000523552 176 ntBASIC1.97□□□□□ -2.09
CBX4O00257 Y_RNA.454-201ENST00000384224 113 ntBASIC1.96□□□□□ -2.1
CBX4O00257 Y_RNA.586-201ENST00000391146 98 ntBASIC1.96□□□□□ -2.1
CBX4O00257 MTND4LP9-201ENST00000427694 174 ntBASIC1.96□□□□□ -2.1
CBX4O00257 RNU7-80P-201ENST00000459562 61 ntBASIC1.96□□□□□ -2.1
CBX4O00257 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.96□□□□□ -2.1
CBX4O00257 Y_RNA.757-201ENST00000578934 114 ntBASIC1.96□□□□□ -2.1
CBX4O00257 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.96□□□□□ -2.1
CBX4O00257 AL513534.2-201ENST00000603836 250 ntBASIC1.96□□□□□ -2.1
CBX4O00257 U7.2-201ENST00000607576 63 ntBASIC1.96□□□□□ -2.1
CBX4O00257 AC011603.4-201ENST00000611325 277 ntBASIC1.96□□□□□ -2.1
CBX4O00257 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
CBX4O00257 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
CBX4O00257 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
CBX4O00257 SNORD33-201ENST00000362761 85 ntBASIC1.95□□□□□ -2.1
CBX4O00257 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
CBX4O00257 SNORA70.7-201ENST00000384159 133 ntBASIC1.95□□□□□ -2.1
CBX4O00257 AC005908.1-201ENST00000468701 347 ntBASIC1.95□□□□□ -2.1
CBX4O00257 RPS26P48-201ENST00000491713 339 ntBASIC1.95□□□□□ -2.1
CBX4O00257 RNU7-43P-201ENST00000516554 64 ntBASIC1.95□□□□□ -2.1
CBX4O00257 Y_RNA.690-201ENST00000516603 95 ntBASIC1.95□□□□□ -2.1
CBX4O00257 Y_RNA.692-201ENST00000516627 105 ntBASIC1.95□□□□□ -2.1
CBX4O00257 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.95□□□□□ -2.1
CBX4O00257 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
CBX4O00257 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CBX4O00257 Y_RNA.351-201ENST00000365436 96 ntBASIC1.94□□□□□ -2.1
CBX4O00257 AL603914.1-201ENST00000401964 204 ntBASIC1.94□□□□□ -2.1
CBX4O00257 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
CBX4O00257 RPS29P24-201ENST00000486345 171 ntBASIC1.94□□□□□ -2.1
CBX4O00257 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
CBX4O00257 RNU6-406P-201ENST00000516470 107 ntBASIC1.94□□□□□ -2.1
CBX4O00257 Y_RNA.686-201ENST00000516548 134 ntBASIC1.94□□□□□ -2.1
CBX4O00257 MIR548AR-201ENST00000582191 57 ntBASIC1.94□□□□□ -2.1
CBX4O00257 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms