Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
TRIM49D1C9J1S8 RNU2-4P-201ENST00000606190 192 ntBASIC0.85□□□□□ -2.27
TRIM49D1C9J1S8 AC012676.2-201ENST00000619258 186 ntBASIC0.85□□□□□ -2.27
TRIM49D1C9J1S8 U4.1-201ENST00000620349 87 ntBASIC0.85□□□□□ -2.27
TRIM49D1C9J1S8 AC078938.1-201ENST00000620993 318 ntBASIC0.85□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.66-201ENST00000362862 102 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 SNORD45.3-201ENST00000363836 72 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.274-201ENST00000364714 101 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 RNY4P28-201ENST00000365281 93 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 SNORA1-201ENST00000384107 130 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 SNORA8.3-201ENST00000384679 139 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 snosnR66.1-201ENST00000391095 99 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AL606845.1-201ENST00000404881 255 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 RNU6-1190P-201ENST00000410811 104 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.626-201ENST00000411288 95 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 AL391903.3-201ENST00000612158 163 ntBASIC0.84□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.20-201ENST00000362479 113 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-144P-201ENST00000383951 107 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-442P-201ENST00000383968 104 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 MIR520C-201ENST00000385005 87 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 MIR136-201ENST00000385207 82 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 AC130289.1-201ENST00000577321 73 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 AC006441.5-201ENST00000612680 209 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 MIR8065-201ENST00000620577 100 ntBASIC0.83□□□□□ -2.28
TRIM49D1C9J1S8 RNU4-17P-201ENST00000365598 141 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 MIR802-201ENST00000390235 94 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 U8.17-201ENST00000391292 132 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 HMGN1P33-201ENST00000432945 451 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 AL138752.1-201ENST00000452964 351 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 MIR548AO-201ENST00000579992 96 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 AC008133.2-201ENST00000624540 351 ntBASIC0.82□□□□□ -2.28
TRIM49D1C9J1S8 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNY1P11-201ENST00000363759 113 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1138P-201ENST00000365359 106 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 SNORD58.1-201ENST00000391313 66 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 MIR548H3-201ENST00000408771 118 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 AC015818.7-201ENST00000428754 109 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 AF228730.3-201ENST00000436691 102 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 AC087499.7-201ENST00000441958 109 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 snoU13.21-201ENST00000459368 105 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1023P-201ENST00000516137 106 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-388P-201ENST00000517012 105 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-389P-201ENST00000517048 105 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 AC023827.1-201ENST00000569247 97 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 uc_338.6-201ENST00000613544 171 ntBASIC0.81□□□□□ -2.28
TRIM49D1C9J1S8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-379P-201ENST00000363813 104 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.634-201ENST00000364811 113 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.412-201ENST00000384001 104 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 SNORA25-201ENST00000384384 134 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MIR616-201ENST00000385293 97 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-913P-201ENST00000390913 95 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-918P-201ENST00000391219 106 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MIR1302-3-201ENST00000408128 138 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU7-45P-201ENST00000459460 63 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-322P-201ENST00000516010 103 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 SNORD79.1-201ENST00000516069 84 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-693P-201ENST00000516134 107 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 SNORA18.4-201ENST00000516440 124 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MIR2681-201ENST00000581814 105 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 AC141273.2-201ENST00000618989 130 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MTND1P7-201ENST00000632801 297 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 MTND5P32-201ENST00000560711 1802 ntBASIC0.8□□□□□ -2.28
TRIM49D1C9J1S8 AC008163.1-202ENST00000636004 2889 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.330-201ENST00000365230 109 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-597P-201ENST00000365620 102 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 SNORD38C-201ENST00000384381 69 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 RNA5SP496-201ENST00000391240 109 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1054P-201ENST00000411293 104 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms