Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 SNORA1.2-201ENST00000365189 134 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 SNORA72.6-201ENST00000384520 129 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 RNU6-77P-201ENST00000410554 91 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 MTND3P13-201ENST00000574391 343 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 SNORD98-201ENST00000636377 67 ntBASIC-1.49□□□□□ -2.65
COL6A5A8TX70 RNU6-912P-201ENST00000363800 104 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 RNU4-22P-201ENST00000411058 166 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 AC093423.1-201ENST00000440817 142 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 AC022447.4-201ENST00000504053 364 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 AF250324.2-201ENST00000608299 610 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 RNA5SP201-201ENST00000410316 124 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 RNU6-602P-201ENST00000411155 105 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 USP9YP30-201ENST00000430729 455 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 RNU7-88P-201ENST00000458752 63 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 RNU7-13P-201ENST00000516413 62 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 TPTEP1-208ENST00000636884 213 ntBASIC-1.5□□□□□ -2.65
COL6A5A8TX70 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 MIR544A-201ENST00000384855 91 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 MIR513B-201ENST00000385136 84 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 SNORD73A-201ENST00000386062 65 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 RNU6-337P-201ENST00000391243 106 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.51□□□□□ -2.65
COL6A5A8TX70 RNU7-57P-201ENST00000459540 60 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-1.51□□□□□ -2.65
COL6A5A8TX70 AC022306.3-201ENST00000619930 550 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 RNU2-29P-201ENST00000410423 189 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 RNU2-13P-201ENST00000515909 113 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 AC055872.1-201ENST00000570978 278 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 MIR4460-201ENST00000577862 86 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 AC091178.2-201ENST00000584401 117 ntBASIC-1.51□□□□□ -2.65
COL6A5A8TX70 MIR379-201ENST00000362218 67 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNU6-543P-201ENST00000362576 108 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNA5SP403-201ENST00000363598 108 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNU2-28P-201ENST00000410457 189 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 MIR4791-201ENST00000607666 84 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 U6.97-201ENST00000636904 101 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 CPDP1-201ENST00000579660 283 ntBASIC-1.52□□□□□ -2.65
COL6A5A8TX70 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 RNU6-20P-201ENST00000384106 107 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 RNU4-55P-201ENST00000410731 137 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AC026410.2-201ENST00000460281 156 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.53□□□□□ -2.65
COL6A5A8TX70 SUMO1P1-201ENST00000497904 306 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AC090616.2-202ENST00000584248 222 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AL450270.1-201ENST00000606160 391 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 U6.73-201ENST00000619194 103 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 SNORD115-39-201ENST00000363694 82 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 SNORD115-8-201ENST00000363856 82 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 RNU6-978P-201ENST00000364371 103 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
COL6A5A8TX70 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AL121757.2-201ENST00000611223 313 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AC005520.5-201ENST00000613926 164 ntBASIC-1.53□□□□□ -2.65
COL6A5A8TX70 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
COL6A5A8TX70 RNU6-449P-201ENST00000383914 107 ntBASIC-1.53□□□□□ -2.66
COL6A5A8TX70 SNORA19.1-201ENST00000410656 129 ntBASIC-1.53□□□□□ -2.66
COL6A5A8TX70 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.53□□□□□ -2.66
COL6A5A8TX70 AC010486.2-201ENST00000505572 483 ntBASIC-1.53□□□□□ -2.66
COL6A5A8TX70 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.53□□□□□ -2.66
COL6A5A8TX70 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 SNORD38C-201ENST00000384381 69 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-861P-201ENST00000516745 106 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-345P-201ENST00000517001 107 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AL358944.1-201ENST00000528537 144 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AC145350.1-201ENST00000567426 208 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 MIR3920-201ENST00000581751 86 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AC026585.1-201ENST00000619582 524 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 snoZ196.1-201ENST00000625269 89 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 SNORA75B-201ENST00000384053 137 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 MIR581-201ENST00000384895 96 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-630P-201ENST00000391258 106 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-847P-201ENST00000411115 108 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AC096949.1-201ENST00000412047 152 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AC244670.1-201ENST00000436879 112 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 AC091931.1-201ENST00000623488 728 ntBASIC-1.54□□□□□ -2.66
COL6A5A8TX70 RNU6-854P-201ENST00000364036 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 SNORD51.1-201ENST00000365405 77 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 MIR525-201ENST00000384978 85 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 MIR1305-201ENST00000408300 86 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 AC010975.2-201ENST00000427781 588 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 AL031274.1-201ENST00000450334 232 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
COL6A5A8TX70 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms