Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 MIR548D2-201ENST00000384955 97 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 AL022718.1-201ENST00000412004 84 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 AC093850.1-201ENST00000454121 251 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 AC022523.2-201ENST00000561045 150 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 SNORD3E-202ENST00000627253 216 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP17L4A6NCW7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP17L4A6NCW7 SNORA51.5-201ENST00000384126 131 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 MT-TI-201ENST00000387365 69 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 RNA5SP144-201ENST00000410846 116 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.93□□□□□ -1.94
USP17L4A6NCW7 RNU7-53P-201ENST00000516705 60 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 AC016717.2-201ENST00000609089 5141 ntBASIC2.93□□□□□ -1.94
USP17L4A6NCW7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.92□□□□□ -1.94
USP17L4A6NCW7 Y_RNA.328-201ENST00000365208 113 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 RN7SKP123-201ENST00000410732 291 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.92□□□□□ -1.94
USP17L4A6NCW7 AC099513.1-201ENST00000490423 301 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 AC026436.1-201ENST00000510537 270 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 MIR5092-201ENST00000583139 88 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 MIR1291-201ENST00000627649 87 ntBASIC2.92□□□□□ -1.94
USP17L4A6NCW7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
USP17L4A6NCW7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
USP17L4A6NCW7 RNU1-52P-201ENST00000384190 164 ntBASIC2.91□□□□□ -1.94
USP17L4A6NCW7 RNA5SP450-201ENST00000411206 102 ntBASIC2.91□□□□□ -1.94
USP17L4A6NCW7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USP17L4A6NCW7 RNU6-893P-201ENST00000458841 100 ntBASIC2.91□□□□□ -1.94
USP17L4A6NCW7 MIR424-201ENST00000362227 98 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 U8.6-201ENST00000364939 135 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 MIR1289-2-201ENST00000408360 111 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 snoU13.23-201ENST00000458863 104 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 RNU7-67P-201ENST00000459003 62 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 SNORA31.25-201ENST00000517242 134 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.9□□□□□ -1.95
USP17L4A6NCW7 AC068339.1-201ENST00000526965 141 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 MIR5009-201ENST00000578736 100 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.9□□□□□ -1.95
USP17L4A6NCW7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
USP17L4A6NCW7 SNORA3A-201ENST00000364113 130 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 Y_RNA.344-201ENST00000365381 112 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 RNA5SP261-201ENST00000410536 106 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 RPS12P2-201ENST00000439728 269 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 RPS29P29-201ENST00000456396 171 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 AC092881.1-201ENST00000638218 2733 ntBASIC2.89□□□□□ -1.95
USP17L4A6NCW7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.89□□□□□ -1.95
USP17L4A6NCW7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
USP17L4A6NCW7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
USP17L4A6NCW7 RNA5SP100-201ENST00000410903 110 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 RNA5SP59-201ENST00000410922 110 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 SNORD123-201ENST00000459473 70 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 RNU7-6P-201ENST00000516845 62 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 MIR3152-201ENST00000579801 74 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 AC006254.2-201ENST00000603259 279 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 MIR6733-201ENST00000635723 61 ntBASIC2.88□□□□□ -1.95
USP17L4A6NCW7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.88□□□□□ -1.95
USP17L4A6NCW7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
USP17L4A6NCW7 MIR526A1-201ENST00000384897 85 ntBASIC2.87□□□□□ -1.95
USP17L4A6NCW7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP17L4A6NCW7 SNORA31.4-201ENST00000516049 129 ntBASIC2.87□□□□□ -1.95
USP17L4A6NCW7 RNU7-193P-201ENST00000516723 65 ntBASIC2.87□□□□□ -1.95
USP17L4A6NCW7 AC004812.1-201ENST00000540773 146 ntBASIC2.87□□□□□ -1.95
USP17L4A6NCW7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
USP17L4A6NCW7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP17L4A6NCW7 SNORD114-1-201ENST00000362705 72 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 SNORA24-201ENST00000384096 131 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-747P-201ENST00000390928 104 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-241P-201ENST00000391148 104 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-177P-201ENST00000411257 104 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 AL591806.2-201ENST00000433122 173 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RPS23P4-201ENST00000487908 423 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 RNU6-958P-201ENST00000516995 106 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 AC015712.3-201ENST00000559380 164 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 DEFB122-202ENST00000569013 197 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.86□□□□□ -1.95
USP17L4A6NCW7 AL162726.3-218ENST00000636401 95 ntBASIC2.86□□□□□ -1.95
USP17L4A6NCW7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 Y_RNA.531-201ENST00000384589 121 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 Y_RNA.544-201ENST00000384650 113 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 MIR764-201ENST00000390811 85 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 RNU6-360P-201ENST00000390944 104 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 MIR1912-201ENST00000410389 80 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 POLR2J4-204ENST00000418424 324 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 RNU2-13P-201ENST00000515909 113 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 SNORA31.17-201ENST00000516953 127 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.85□□□□□ -1.95
USP17L4A6NCW7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
USP17L4A6NCW7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms