Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 RNU5F-1-201ENST00000362507 117 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 SNORA38-201ENST00000363946 132 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 SNORA27-201ENST00000384323 126 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 CST9LP2-201ENST00000437612 320 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 AL135938.1-201ENST00000443141 297 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 UBBP3-201ENST00000445497 241 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 RNU7-2P-201ENST00000516096 62 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 AC005786.1-201ENST00000588553 154 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
DNMT3AQ9Y6K1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-1084P-201ENST00000362498 107 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 RNU1-70P-201ENST00000362618 164 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 SNORD68-201ENST00000363214 84 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.168-201ENST00000363740 102 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 U8.5-201ENST00000364528 136 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.494-201ENST00000384432 111 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-1241P-201ENST00000384536 107 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 RPL23AP83-201ENST00000434984 473 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.2□□□□□ -1.9
DNMT3AQ9Y6K1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 RNU1-58P-201ENST00000362413 163 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 SNORD56.5-201ENST00000364281 72 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.241-201ENST00000364470 117 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 RNU1-91P-201ENST00000364746 163 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 snoU2-30.1-201ENST00000365012 70 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 RNU7-34P-201ENST00000459394 64 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 SNORD45.4-201ENST00000516629 73 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-807P-201ENST00000516805 107 ntBASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DNMT3AQ9Y6K1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 MIR208A-201ENST00000362287 71 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 SNORA22.1-201ENST00000362701 134 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 SNORA38.1-201ENST00000364172 131 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.336-201ENST00000365307 109 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 MIR206-201ENST00000384872 86 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 MIR154-201ENST00000385243 84 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RNU7-96P-201ENST00000459535 64 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RNU7-28P-201ENST00000516759 62 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-90P-201ENST00000606352 106 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 MIR7112-201ENST00000616126 65 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 CTSLP2-204ENST00000629029 392 ntBASIC3.18□□□□□ -1.9
DNMT3AQ9Y6K1 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 SNORD4B-201ENST00000459083 72 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 MIR4796-201ENST00000580742 81 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 MIR5195-201ENST00000583555 115 ntBASIC3.17□□□□□ -1.9
DNMT3AQ9Y6K1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 SNORD115-3-201ENST00000363100 82 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.173-201ENST00000363776 113 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-205P-201ENST00000390858 107 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 RNA5SP482-201ENST00000391269 118 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 FGF7P7-201ENST00000514120 227 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 RNU6-826P-201ENST00000516827 104 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 RNA5SP137-201ENST00000516833 135 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 AC090821.2-201ENST00000523552 176 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 AC069114.2-201ENST00000604699 304 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 MIR6841-201ENST00000637129 72 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 AL442644.1-201ENST00000454390 3105 ntBASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.16□□□□□ -1.9
DNMT3AQ9Y6K1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DNMT3AQ9Y6K1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
DNMT3AQ9Y6K1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
DNMT3AQ9Y6K1 Y_RNA.508-201ENST00000384502 114 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA80E-201ENST00000384744 137 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 AC244636.1-201ENST00000421152 228 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 TRBV12-1-201ENST00000479785 344 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 Y_RNA.660-201ENST00000516002 120 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms