Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR378A-201ENST00000362177 66 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.200-201ENST00000364018 102 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-60P-201ENST00000364792 103 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-484P-201ENST00000384016 107 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-493P-201ENST00000391321 108 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 BTF3P4-201ENST00000418852 495 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 AC245047.7-201ENST00000440265 293 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 AC087499.4-201ENST00000448505 178 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 AC107297.1-201ENST00000459991 176 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 AL133373.1-201ENST00000497098 94 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU4-57P-201ENST00000515980 135 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 AC008133.2-201ENST00000624540 351 ntBASIC1.71□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORD45.3-201ENST00000363836 72 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.515-201ENST00000384535 112 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 SNRPGP8-201ENST00000454064 226 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-693P-201ENST00000516134 107 ntBASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.7□□□□□ -2.14
COL4A3BPQ9Y5P4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-888P-201ENST00000363010 101 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORD115-28-201ENST00000363931 81 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 AC048334.1-201ENST00000477975 159 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 RNY3P16-201ENST00000516338 101 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR548AR-201ENST00000582191 57 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 AC097639.2-201ENST00000603159 172 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 Z83818.1-201ENST00000603584 150 ntBASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A3BPQ9Y5P4 AP000648.3-201ENST00000623539 4507 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-923P-201ENST00000364753 107 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU4-70P-201ENST00000384579 139 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-197P-201ENST00000516680 100 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORA70.22-201ENST00000517160 124 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU7-181P-201ENST00000517234 74 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR3192-201ENST00000584920 77 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 AC009779.6-201ENST00000603972 165 ntBASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A3BPQ9Y5P4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 RNA5SP327-201ENST00000362494 101 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU4-43P-201ENST00000410628 137 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-847P-201ENST00000411115 108 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AL121914.1-201ENST00000450188 156 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU7-41P-201ENST00000515917 61 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AC109810.1-201ENST00000534066 224 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AC019288.1-201ENST00000557918 224 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AP000942.4-201ENST00000604811 241 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU2-4P-201ENST00000606190 192 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 AC141273.2-201ENST00000618989 130 ntBASIC1.67□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR411-201ENST00000362239 96 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORA70.7-201ENST00000384159 133 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORD61-201ENST00000384252 73 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR222-201ENST00000384992 110 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-578P-201ENST00000390980 103 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORD28B-201ENST00000390993 75 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU7-95P-201ENST00000459222 64 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR4498-201ENST00000577599 66 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 AL022345.2-201ENST00000606307 135 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 snoU13.31-201ENST00000607291 104 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 AC134878.1-201ENST00000619901 243 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR4251-201ENST00000635819 61 ntBASIC1.66□□□□□ -2.14
COL4A3BPQ9Y5P4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL4A3BPQ9Y5P4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
COL4A3BPQ9Y5P4 MIR26B-201ENST00000362251 77 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORA51.10-201ENST00000384418 136 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 MIR518F-201ENST00000384973 87 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-910P-201ENST00000390844 107 ntBASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-34-201ENST00000362441 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-12-201ENST00000362583 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-29-201ENST00000362834 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-9-201ENST00000362912 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-21-201ENST00000362963 81 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms