Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AC245060.5-201ENST00000610778 3293 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AL589743.1-201ENST00000551932 2712 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 RNY4P6-201ENST00000363667 96 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 RNU1-133P-201ENST00000364867 167 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.369-201ENST00000365568 117 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 RNU6-1014P-201ENST00000383940 103 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 RNU6-756P-201ENST00000383997 107 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 MIR1302-5-201ENST00000408164 150 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 AC015726.2-201ENST00000620112 122 ntBASIC2.57□□□□□ -2
PCDHA11Q9Y5I1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.4-201ENST00000362333 112 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 SNORA63.5-201ENST00000363548 123 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.298-201ENST00000364960 107 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.338-201ENST00000365320 114 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.362-201ENST00000365518 110 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 STAG3L5P-204ENST00000443759 179 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 RPL39P34-201ENST00000477141 156 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PCDHA11Q9Y5I1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.348-201ENST00000365403 103 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 SNORA51.5-201ENST00000384126 131 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 RNU6-905P-201ENST00000384434 107 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 RNU6-440P-201ENST00000390882 105 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 RNU7-80P-201ENST00000459562 61 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 SNORA18.7-201ENST00000516910 131 ntBASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
PCDHA11Q9Y5I1 SNORD115-3-201ENST00000363100 82 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 RNU6-414P-201ENST00000363705 104 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.351-201ENST00000365436 96 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 SNORD38C-201ENST00000384381 69 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 MIR759-201ENST00000390224 91 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 U8.17-201ENST00000391292 132 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 RNY4P30-201ENST00000410216 95 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 AC114811.1-201ENST00000507207 168 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 RNU6-830P-201ENST00000516353 107 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 SUMO2P16-201ENST00000519475 264 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 AC002984.1-201ENST00000591692 448 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 AC069114.2-201ENST00000604699 304 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 SNORA28-201ENST00000606769 126 ntBASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
PCDHA11Q9Y5I1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 MIRLET7C-201ENST00000362160 84 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 RNU6-640P-201ENST00000363693 105 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.454-201ENST00000384224 113 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 MT-TI-201ENST00000387365 69 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AL627390.1-201ENST00000396055 340 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 RNU7-164P-201ENST00000459221 62 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 RNU7-123P-201ENST00000515911 60 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AP001318.4-201ENST00000616637 121 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AC091932.4-201ENST00000623386 200 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AC027279.3-201ENST00000625055 122 ntBASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
PCDHA11Q9Y5I1 AL442644.1-201ENST00000454390 3105 ntBASIC2.53□□□□□ -2.01
PCDHA11Q9Y5I1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-163P-201ENST00000384396 106 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 MIR3683-201ENST00000580847 82 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 MIR4305-201ENST00000583252 102 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
PCDHA11Q9Y5I1 MIR518A2-201ENST00000384966 87 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 BX510359.4-201ENST00000423750 193 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA31.10-201ENST00000516482 106 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 MIR4778-201ENST00000577635 80 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 AL596211.1-201ENST00000569873 2277 ntBASIC2.51□□□□□ -2.01
PCDHA11Q9Y5I1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 U8.6-201ENST00000364939 135 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA64-201ENST00000384674 134 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 RNA5SP465-201ENST00000391195 109 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 AC069257.2-201ENST00000441819 155 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 578.3 ms