Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RN7SL853P-201ENST00000617250 223 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RNA5SP259-201ENST00000365541 109 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 SNORA20-201ENST00000384662 132 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 SNORA64-201ENST00000384674 134 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 MIR136-201ENST00000385207 82 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 MIR624-201ENST00000385217 97 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 SNORA18.4-201ENST00000516440 124 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 SNORD36C-201ENST00000516733 66 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 FAM106DP-201ENST00000586416 501 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 AC134878.1-201ENST00000619901 243 ntBASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 MIR676-201ENST00000390702 67 ntBASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6-460P-201ENST00000391158 108 ntBASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 RNU7-181P-201ENST00000517234 74 ntBASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 AC015688.6-201ENST00000577737 104 ntBASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
R3HCC1Q9Y3T6 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.568-201ENST00000384742 113 ntBASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 AL392103.1-201ENST00000447000 198 ntBASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 MIR613-201ENST00000385248 95 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 U8.17-201ENST00000391292 132 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 AC019129.1-201ENST00000403786 261 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 AC131055.1-201ENST00000584626 316 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 AL096840.1-201ENST00000603287 93 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.22□□□□□ -2.05
R3HCC1Q9Y3T6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-704P-201ENST00000364162 103 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.410-201ENST00000383992 113 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.494-201ENST00000384432 111 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 SNORA18.7-201ENST00000516910 131 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 AP003484.1-201ENST00000530974 250 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 MIR3122-201ENST00000577243 73 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 MIR3945-201ENST00000581853 98 ntBASIC2.21□□□□□ -2.06
R3HCC1Q9Y3T6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 SNORD50.2-201ENST00000365465 70 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.420-201ENST00000384043 110 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 MIR653-201ENST00000385279 96 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.584-201ENST00000391090 114 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 AL023284.1-201ENST00000403956 276 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 RNU4-61P-201ENST00000411243 107 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 AC087499.4-201ENST00000448505 178 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 RNU2-60P-201ENST00000517290 128 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 MIR5197-201ENST00000583721 112 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
R3HCC1Q9Y3T6 MTND5P32-201ENST00000560711 1802 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 SNORA2.2-201ENST00000365473 135 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 MIR30A-201ENST00000385092 71 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 SNORD28B-201ENST00000390993 75 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-257P-201ENST00000410238 98 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 SNORD123-201ENST00000459473 70 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 AC010332.2-201ENST00000613083 1904 ntBASIC2.19□□□□□ -2.06
R3HCC1Q9Y3T6 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 U8.1-201ENST00000362843 134 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 SCARNA15-202ENST00000516881 127 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 AC090049.2-201ENST00000550377 109 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 MIR548AR-201ENST00000582191 57 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 MIR8063-201ENST00000621930 81 ntBASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
R3HCC1Q9Y3T6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-508P-201ENST00000363231 103 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 snoU13.9-201ENST00000458927 103 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 RNU1-41P-201ENST00000516161 162 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 RNU1-48P-201ENST00000516400 162 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 MIR3910-1-201ENST00000580936 111 ntBASIC2.17□□□□□ -2.06
R3HCC1Q9Y3T6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 Y_RNA.241-201ENST00000364470 117 ntBASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 MTND4LP9-201ENST00000427694 174 ntBASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 HSPE1P24-201ENST00000450782 238 ntBASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 RPS26P48-201ENST00000491713 339 ntBASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 SNORA74.3-201ENST00000517108 154 ntBASIC2.16□□□□□ -2.06
R3HCC1Q9Y3T6 RNU6-915P-201ENST00000364943 103 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 SNORD1A-201ENST00000364968 72 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 SNORD41-201ENST00000386967 70 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 Y_RNA.586-201ENST00000391146 98 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 RNA5SP236-201ENST00000516169 116 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 RNU6-922P-201ENST00000516753 99 ntBASIC2.15□□□□□ -2.07
R3HCC1Q9Y3T6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
R3HCC1Q9Y3T6 SNORD114-1-201ENST00000362705 72 ntBASIC2.14□□□□□ -2.07
R3HCC1Q9Y3T6 Y_RNA.370-201ENST00000365589 108 ntBASIC2.14□□□□□ -2.07
R3HCC1Q9Y3T6 MIR570-201ENST00000384917 97 ntBASIC2.14□□□□□ -2.07
R3HCC1Q9Y3T6 SNORA40.5-201ENST00000391061 128 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms