Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 AC114811.1-201ENST00000507207 168 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 AC006441.5-201ENST00000612680 209 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
SSX2IPQ9Y2D8 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-199P-201ENST00000362954 107 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-833P-201ENST00000363486 107 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-978P-201ENST00000364371 103 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 U8.16-201ENST00000391279 133 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 MIR891A-201ENST00000401237 79 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 AC021506.2-201ENST00000612354 169 ntBASIC1.89□□□□□ -2.11
SSX2IPQ9Y2D8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 RNU4-11P-201ENST00000365287 132 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.343-201ENST00000365354 112 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 SNORA75.5-201ENST00000391291 81 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 SNRPGP13-201ENST00000442212 177 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 RNU7-12P-201ENST00000516030 62 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-346P-201ENST00000516288 111 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 MIR548X2-201ENST00000579776 100 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 MIR3658-201ENST00000636291 56 ntBASIC1.88□□□□□ -2.11
SSX2IPQ9Y2D8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-888P-201ENST00000363010 101 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-268P-201ENST00000364174 107 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 MIR613-201ENST00000385248 95 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 MIR513C-201ENST00000401352 84 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 SNRPGP14-201ENST00000435400 219 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 PGBD4P5-201ENST00000445958 426 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 AC099513.1-201ENST00000490423 301 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 AC112693.2-201ENST00000556538 232 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
SSX2IPQ9Y2D8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD50.2-201ENST00000365465 70 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD61-201ENST00000384252 73 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD38C-201ENST00000384381 69 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-693P-201ENST00000516134 107 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
SSX2IPQ9Y2D8 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-187P-201ENST00000384139 106 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 MIR660-201ENST00000385235 97 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 RNU4-61P-201ENST00000411243 107 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 AL365205.2-201ENST00000594586 68 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.85□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-414P-201ENST00000363705 104 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 MIR548O-201ENST00000408583 114 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-321P-201ENST00000410912 106 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 AC090142.3-201ENST00000519012 385 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 AC007751.1-201ENST00000529260 376 ntBASIC1.84□□□□□ -2.11
SSX2IPQ9Y2D8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-818P-201ENST00000364837 108 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 MIR499A-201ENST00000384903 122 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 MIR452-201ENST00000385020 85 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-588P-201ENST00000410281 105 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 AC245517.4-201ENST00000448601 281 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 SNORA18.4-201ENST00000516440 124 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 AP001485.1-201ENST00000604799 199 ntBASIC1.83□□□□□ -2.12
SSX2IPQ9Y2D8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-661P-201ENST00000362409 107 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-704P-201ENST00000364162 103 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNA5SP127-201ENST00000411051 133 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 AC015922.2-201ENST00000435593 184 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 SNORA25.12-201ENST00000516202 82 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-970P-201ENST00000516312 107 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-830P-201ENST00000516353 107 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-789P-201ENST00000517105 102 ntBASIC1.82□□□□□ -2.12
SSX2IPQ9Y2D8 AC134878.1-201ENST00000619901 243 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 407.9 ms