Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 RNA5SP173-201ENST00000364857 136 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 Y_RNA.507-201ENST00000384500 99 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 Y_RNA.531-201ENST00000384589 121 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 HMGN2P35-201ENST00000412164 270 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 AC107297.1-201ENST00000459991 176 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 RNA5SP282-201ENST00000516355 108 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 RNU6-548P-201ENST00000517083 115 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 RNU6-158P-201ENST00000517104 100 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 MIR4658-201ENST00000584344 65 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 AC069114.2-201ENST00000604699 304 ntBASIC3.36□□□□□ -1.87
ZC3H4Q9UPT8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 Y_RNA.93-201ENST00000363066 109 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 RPL32P35-201ENST00000415214 394 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 PGBD4P5-201ENST00000445958 426 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 AC113410.1-201ENST00000505029 247 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 MIR3126-201ENST00000577443 74 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.35□□□□□ -1.87
ZC3H4Q9UPT8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 Y_RNA.155-201ENST00000363632 101 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 MIR524-201ENST00000385242 87 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 RNU4-53P-201ENST00000410828 140 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 Z98742.3-201ENST00000418637 326 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 AL356320.1-201ENST00000429616 163 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 RNU7-181P-201ENST00000517234 74 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 FAM71BP1-201ENST00000604431 523 ntBASIC3.34□□□□□ -1.87
ZC3H4Q9UPT8 Y_RNA.342-201ENST00000365352 113 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 RN7SKP223-201ENST00000410582 62 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 RNA5SP144-201ENST00000410846 116 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 AL512326.2-201ENST00000426359 151 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 RNU7-96P-201ENST00000459535 64 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 SCARNA23-201ENST00000516060 130 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 RN7SKP12-201ENST00000516275 143 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 MIR5094-201ENST00000578766 85 ntBASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.33□□□□□ -1.88
ZC3H4Q9UPT8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 MIR494-201ENST00000349529 81 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 AC015922.2-201ENST00000435593 184 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 RPS29P6-201ENST00000438196 145 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 RNU2-11P-201ENST00000459191 187 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 RNU6-998P-201ENST00000515894 101 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 AC022202.1-201ENST00000613515 211 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 AC021613.1-201ENST00000623880 111 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 MIR203B-201ENST00000636080 86 ntBASIC3.32□□□□□ -1.88
ZC3H4Q9UPT8 MIR1267-201ENST00000408723 78 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 AC004812.1-201ENST00000540773 146 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 AC005786.1-201ENST00000588553 154 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 AC022513.1-201ENST00000624512 117 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 MIR1245B-201ENST00000636115 69 ntBASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZC3H4Q9UPT8 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 Y_RNA.494-201ENST00000384432 111 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 MIR450A2-201ENST00000385022 100 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 HSPE1P9-201ENST00000440046 311 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 RPS23P4-201ENST00000487908 423 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 IGLV3-17-201ENST00000519099 244 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 AP003327.1-201ENST00000529684 127 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 MIR1255B1-201ENST00000636325 63 ntBASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZC3H4Q9UPT8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 MIRLET7C-201ENST00000362160 84 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 RNU1-58P-201ENST00000362413 163 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-34-201ENST00000362441 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-12-201ENST00000362583 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-29-201ENST00000362834 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-9-201ENST00000362912 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-21-201ENST00000362963 81 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-14-201ENST00000363090 81 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-13-201ENST00000363358 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-41-201ENST00000363608 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-11-201ENST00000363616 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-5-201ENST00000363633 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-39-201ENST00000363694 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-4-201ENST00000363810 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-16-201ENST00000363887 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-6-201ENST00000363942 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-42-201ENST00000364273 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 RNU6-1019P-201ENST00000364424 107 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-15-201ENST00000364809 81 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-1-201ENST00000364961 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-26-201ENST00000365067 82 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms