Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 MIR6740-201ENST00000618268 113 ntBASIC0.17□□□□□ -2.38
NUP50Q9UKX7 AC134878.1-201ENST00000619901 243 ntBASIC0.17□□□□□ -2.38
NUP50Q9UKX7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.17□□□□□ -2.38
NUP50Q9UKX7 RNU6-1115P-201ENST00000362490 106 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 RNA5SP257-201ENST00000363023 116 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 Y_RNA.286-201ENST00000364813 102 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 MIR938-201ENST00000401216 83 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 SNORD100-201ENST00000408573 76 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 MTND1P14-201ENST00000427400 950 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC236972.2-201ENST00000434979 310 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 SNRPGP12-201ENST00000449481 213 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 RNU4-77P-201ENST00000516692 156 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC022523.2-201ENST00000561045 150 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC008608.1-201ENST00000603910 127 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AL355297.3-201ENST00000604082 446 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC084781.2-201ENST00000615568 161 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC104985.2-201ENST00000620598 500 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC022140.2-201ENST00000623500 188 ntBASIC0.16□□□□□ -2.38
NUP50Q9UKX7 AC010332.2-201ENST00000613083 1904 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-34-201ENST00000362441 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-12-201ENST00000362583 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-29-201ENST00000362834 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-9-201ENST00000362912 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-21-201ENST00000362963 81 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-14-201ENST00000363090 81 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-13-201ENST00000363358 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-41-201ENST00000363608 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-11-201ENST00000363616 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-5-201ENST00000363633 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-39-201ENST00000363694 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-4-201ENST00000363810 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-16-201ENST00000363887 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-6-201ENST00000363942 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-42-201ENST00000364273 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORA63C-201ENST00000364578 129 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-15-201ENST00000364809 81 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-1-201ENST00000364961 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-26-201ENST00000365067 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-10-201ENST00000365073 81 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-43-201ENST00000365503 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-36-201ENST00000365629 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 AC107297.1-201ENST00000459991 176 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 RNA5SP94-201ENST00000516917 108 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 AC090897.1-201ENST00000580909 226 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 RPS29P30-201ENST00000600975 111 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 AC092447.9-201ENST00000603395 144 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 SNORD115-40-201ENST00000606510 82 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 U6atac.1-201ENST00000616025 117 ntBASIC0.15□□□□□ -2.39
NUP50Q9UKX7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
NUP50Q9UKX7 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.143-201ENST00000363520 106 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.241-201ENST00000364470 117 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.813-201ENST00000364639 102 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 RNY3-201ENST00000365484 102 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.439-201ENST00000384119 94 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 RNU6-913P-201ENST00000390913 95 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 AL160004.2-201ENST00000432935 350 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 POLR2KP2-201ENST00000438155 177 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 AC098614.3-201ENST00000438957 440 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 MIR18B-201ENST00000454574 71 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 RNU7-67P-201ENST00000459003 62 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 SNORA40.14-201ENST00000516543 86 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 SNORA20.3-201ENST00000516880 132 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 AC007751.1-201ENST00000529260 376 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 AL021707.8-201ENST00000609428 183 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.14□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.39-201ENST00000362620 98 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6-308P-201ENST00000390957 107 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6-1248P-201ENST00000391096 64 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU7-73P-201ENST00000458743 63 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU7-152P-201ENST00000458982 64 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6-1170P-201ENST00000515974 106 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU7-149P-201ENST00000516739 59 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6-958P-201ENST00000516995 106 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 AP000942.4-201ENST00000604811 241 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 SNORA25.18-201ENST00000607153 114 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 SNORD58B-201ENST00000607313 66 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.13□□□□□ -2.39
NUP50Q9UKX7 AL138825.1-201ENST00000618587 192 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 AL606534.2-204ENST00000635008 178 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 Z97988.1-201ENST00000637697 135 ntBASIC0.13□□□□□ -2.39
NUP50Q9UKX7 RNU6-899P-201ENST00000363947 107 ntBASIC0.12□□□□□ -2.39
NUP50Q9UKX7 Y_RNA.418-201ENST00000384029 102 ntBASIC0.12□□□□□ -2.39
NUP50Q9UKX7 SNORD38B-201ENST00000384690 67 ntBASIC0.12□□□□□ -2.39
NUP50Q9UKX7 MIR125B2-201ENST00000385128 89 ntBASIC0.12□□□□□ -2.39
NUP50Q9UKX7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms