Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 MIR15B-201ENST00000385045 98 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 MIR1302-6-201ENST00000408466 90 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 RPS26P48-201ENST00000491713 339 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 RN7SKP164-201ENST00000516138 266 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 RNU7-149P-201ENST00000516739 59 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 MIR548AR-201ENST00000582191 57 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 AL391903.3-201ENST00000612158 163 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 U2.14-201ENST00000615943 113 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 uc_338.4-201ENST00000616635 176 ntBASIC0.87□□□□□ -2.27
APOBEC3BQ9UH17 AL442644.1-201ENST00000454390 3105 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 Y_RNA.24-201ENST00000362508 103 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 Y_RNA.47-201ENST00000362697 108 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 RNU6-1309P-201ENST00000363305 108 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 SNORA75.2-201ENST00000391138 150 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 SNORA75.3-201ENST00000391231 150 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 SNORD79.1-201ENST00000516069 84 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 SNORD116-28-201ENST00000516123 91 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 RNU7-181P-201ENST00000517234 74 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 CYP3A137P-201ENST00000562436 69 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 AC006006.1-201ENST00000603082 144 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.86□□□□□ -2.27
APOBEC3BQ9UH17 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 Y_RNA.176-201ENST00000363815 109 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 Y_RNA.587-201ENST00000391210 103 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 MTND2P23-201ENST00000422990 651 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 RNU6-327P-201ENST00000516270 127 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 SCARNA15.1-201ENST00000516384 125 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 RNU7-43P-201ENST00000516554 64 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 AC006441.5-201ENST00000612680 209 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 Y_RNA.802-201ENST00000614892 130 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 Pinc.1-201ENST00000616452 154 ntBASIC0.85□□□□□ -2.27
APOBEC3BQ9UH17 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 MIR526A2-201ENST00000390198 65 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 RNA5SP496-201ENST00000391240 109 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 U8.17-201ENST00000391292 132 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 AL358176.2-201ENST00000425769 204 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 AC023449.1-201ENST00000454464 154 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 MTCO2P24-201ENST00000515611 426 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 RNU7-25P-201ENST00000516544 62 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 RNU6-1007P-201ENST00000516586 107 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 PRELID3BP2-201ENST00000605362 201 ntBASIC0.84□□□□□ -2.27
APOBEC3BQ9UH17 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 MIR103A2-201ENST00000362154 78 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 MIR335-201ENST00000362173 94 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 RNA5SP264-201ENST00000363115 107 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.229-201ENST00000364347 113 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 SNORA8.3-201ENST00000384679 139 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 RNU2-38P-201ENST00000410856 79 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 RNU4-57P-201ENST00000515980 135 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.666-201ENST00000516187 112 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 RNU6-830P-201ENST00000516353 107 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC100767.1-201ENST00000528178 123 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC012433.1-201ENST00000588916 398 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.54-201ENST00000362766 105 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.149-201ENST00000363558 117 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.330-201ENST00000365230 109 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.486-201ENST00000384398 107 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 MIR548O-201ENST00000408583 114 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 MIR1185-1-201ENST00000408598 86 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.590-201ENST00000410140 107 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 SNORD2.1-201ENST00000458762 69 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 SNORD77.4-201ENST00000516158 81 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.679-201ENST00000516416 91 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 MIR4643-201ENST00000577473 78 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 U6.104-201ENST00000637979 90 ntBASIC0.82□□□□□ -2.28
APOBEC3BQ9UH17 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.82-201ENST00000363000 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.92-201ENST00000363043 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.162-201ENST00000363683 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.235-201ENST00000364412 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.277-201ENST00000364754 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.306-201ENST00000365015 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.312-201ENST00000365089 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.322-201ENST00000365151 102 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 RNU6-1138P-201ENST00000365359 106 ntBASIC0.81□□□□□ -2.28
APOBEC3BQ9UH17 Y_RNA.547-201ENST00000384654 119 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms