Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RNU7-149P-201ENST00000516739 59 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 AC006006.1-201ENST00000603082 144 ntBASIC1.09□□□□□ -2.23
NLGN3Q9NZ94 snoU2_19.4-201ENST00000364329 80 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.477-201ENST00000384352 108 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.539-201ENST00000384635 107 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 SNORA8.3-201ENST00000384679 139 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 MIR1302-3-201ENST00000408128 138 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 SCARNA8-201ENST00000515924 131 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 SNORD77.4-201ENST00000516158 81 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 SNORA18.7-201ENST00000516910 131 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 SNORA74.3-201ENST00000517108 154 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 AL162730.1-201ENST00000605734 292 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 AC006441.5-201ENST00000612680 209 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NLGN3Q9NZ94 RNU6-653P-201ENST00000363074 106 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 SNORD27-201ENST00000363981 72 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 RNU6-1138P-201ENST00000365359 106 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 RNU6-196P-201ENST00000384315 107 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 SNORD123-201ENST00000459473 70 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 RN7SKP164-201ENST00000516138 266 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.679-201ENST00000516416 91 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 U4.1-201ENST00000620349 87 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 AL365265.1-201ENST00000621045 234 ntBASIC1.07□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.144-201ENST00000363521 113 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.452-201ENST00000384202 108 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 MT-TT-201ENST00000387460 66 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 MIR548H3-201ENST00000408771 118 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 RNU6-830P-201ENST00000516353 107 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 RNU6-453P-201ENST00000516819 85 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 MIR5688-201ENST00000580619 83 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 MIR3128-201ENST00000581957 66 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 AC062037.2-201ENST00000610137 73 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 AL442067.1-201ENST00000613261 223 ntBASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NLGN3Q9NZ94 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.60-201ENST00000362831 98 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.350-201ENST00000365409 98 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 SNORD38C-201ENST00000384381 69 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.486-201ENST00000384398 107 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.587-201ENST00000391210 103 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 RNU6-381P-201ENST00000391259 108 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 SNORD58.1-201ENST00000391313 66 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 RNU6-1054P-201ENST00000411293 104 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 RNU4-57P-201ENST00000515980 135 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 RNU7-25P-201ENST00000516544 62 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 MIR548AR-201ENST00000582191 57 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 MIR3149-201ENST00000584629 83 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 AC022709.1-201ENST00000615967 87 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 7SK.10-201ENST00000621414 298 ntBASIC1.05□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.20-201ENST00000362479 113 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.292-201ENST00000364904 97 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 RNU6-702P-201ENST00000364982 107 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.307-201ENST00000365022 117 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 RNU6-463P-201ENST00000384340 107 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 MIR15B-201ENST00000385045 98 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.666-201ENST00000516187 112 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 MIR4764-201ENST00000580680 88 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 AL391903.3-201ENST00000612158 163 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 Pinc.1-201ENST00000616452 154 ntBASIC1.04□□□□□ -2.24
NLGN3Q9NZ94 RNY4P28-201ENST00000365281 93 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 RNU6-484P-201ENST00000384016 107 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.447-201ENST00000384184 113 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 MIR520C-201ENST00000385005 87 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 AC023449.1-201ENST00000454464 154 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
NLGN3Q9NZ94 RNY3P16-201ENST00000516338 101 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms