Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR4764-201ENST00000580680 88 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 AC072026.1-201ENST00000605023 201 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 AC004792.1-201ENST00000614523 137 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 Y_RNA.75-201ENST00000362927 97 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 RNU6-275P-201ENST00000364910 107 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 Y_RNA.785-201ENST00000384290 109 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 Y_RNA.547-201ENST00000384654 119 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 MIR548O-201ENST00000408583 114 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 SNRPGP13-201ENST00000442212 177 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 RNU6-197P-201ENST00000516680 100 ntBASIC1.69□□□□□ -2.14
DDX56Q9NY93 Y_RNA.66-201ENST00000362862 102 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 SNORA79-201ENST00000408376 140 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 RNU4-43P-201ENST00000410628 137 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 AL133373.1-201ENST00000497098 94 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 SNORA31.2-201ENST00000516019 134 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 RNU6-504P-201ENST00000516568 104 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 RNU6-861P-201ENST00000516745 106 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 RNU6-1270P-201ENST00000517128 108 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 AC007751.1-201ENST00000529260 376 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 MRPS18CP4-201ENST00000535821 231 ntBASIC1.68□□□□□ -2.14
DDX56Q9NY93 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
DDX56Q9NY93 RNA5SP48-201ENST00000363969 126 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.67□□□□□ -2.14
DDX56Q9NY93 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 RNU7-120P-201ENST00000459334 63 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 AC107297.1-201ENST00000459991 176 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 SNORA70.22-201ENST00000517160 124 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 AC104984.5-201ENST00000586878 94 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
DDX56Q9NY93 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.67□□□□□ -2.14
DDX56Q9NY93 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 Y_RNA.370-201ENST00000365589 108 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 SNORD24-201ENST00000383884 75 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 MIR548A2-201ENST00000384956 97 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.66□□□□□ -2.14
DDX56Q9NY93 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.66□□□□□ -2.14
DDX56Q9NY93 RNU7-181P-201ENST00000517234 74 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 AL096861.1-201ENST00000610899 123 ntBASIC1.66□□□□□ -2.14
DDX56Q9NY93 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.66□□□□□ -2.14
DDX56Q9NY93 Y_RNA.23-201ENST00000362496 106 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 RNU6-682P-201ENST00000363843 106 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 MIR518F-201ENST00000384973 87 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 MIR504-201ENST00000385065 83 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.65□□□□□ -2.15
DDX56Q9NY93 RNU4-57P-201ENST00000515980 135 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 RNU6-182P-201ENST00000516970 105 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 MIR548AR-201ENST00000582191 57 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 AC097639.2-201ENST00000603159 172 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
DDX56Q9NY93 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.65□□□□□ -2.15
DDX56Q9NY93 MIR26B-201ENST00000362251 77 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 RNU6-888P-201ENST00000363010 101 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 RNU6-312P-201ENST00000364629 107 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 RNU6-643P-201ENST00000384018 107 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 MIR222-201ENST00000384992 110 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 AC006461.1-201ENST00000412637 326 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.64□□□□□ -2.15
DDX56Q9NY93 AC048334.1-201ENST00000477975 159 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
DDX56Q9NY93 AC019288.1-201ENST00000557918 224 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 MIR378D2-201ENST00000580636 98 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 MIR6715A-201ENST00000615929 79 ntBASIC1.64□□□□□ -2.15
DDX56Q9NY93 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 SNORD115-28-201ENST00000363931 81 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 SEPT7P4-201ENST00000437076 306 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 AC087499.4-201ENST00000448505 178 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
DDX56Q9NY93 MIR4431-201ENST00000579990 94 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 AC008133.2-201ENST00000624540 351 ntBASIC1.63□□□□□ -2.15
DDX56Q9NY93 SNORA1-201ENST00000384107 130 ntBASIC1.62□□□□□ -2.15
DDX56Q9NY93 SNORA25-201ENST00000384384 134 ntBASIC1.62□□□□□ -2.15
DDX56Q9NY93 AF228730.3-201ENST00000436691 102 ntBASIC1.62□□□□□ -2.15
DDX56Q9NY93 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
DDX56Q9NY93 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
DDX56Q9NY93 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.62□□□□□ -2.15
DDX56Q9NY93 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
DDX56Q9NY93 Y_RNA.37-201ENST00000362606 108 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 Y_RNA.240-201ENST00000364469 95 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 Y_RNA.537-201ENST00000384626 109 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 MIR570-201ENST00000384917 97 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 RNU6-910P-201ENST00000390844 107 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 SNORD12-201ENST00000391002 90 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 AC074198.2-201ENST00000508153 258 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 Y_RNA.662-201ENST00000516028 97 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.61□□□□□ -2.15
DDX56Q9NY93 MIR3668-201ENST00000582138 75 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 AL022345.2-201ENST00000606307 135 ntBASIC1.61□□□□□ -2.15
DDX56Q9NY93 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1075.7 ms