Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 AC015726.2-201ENST00000620112 122 ntBASIC1.92□□□□□ -2.1
TDP1Q9NUW8 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 MIR526A1-201ENST00000384897 85 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 MIR516B2-201ENST00000385190 85 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 SNORA75.5-201ENST00000391291 81 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.91□□□□□ -2.1
TDP1Q9NUW8 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.91□□□□□ -2.1
TDP1Q9NUW8 MIR3129-201ENST00000581095 76 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 AL365205.2-201ENST00000594586 68 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
TDP1Q9NUW8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
TDP1Q9NUW8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TDP1Q9NUW8 RNU6-199P-201ENST00000362954 107 ntBASIC1.9□□□□□ -2.11
TDP1Q9NUW8 MIR513A1-201ENST00000385138 129 ntBASIC1.9□□□□□ -2.11
TDP1Q9NUW8 RNU6-588P-201ENST00000410281 105 ntBASIC1.9□□□□□ -2.11
TDP1Q9NUW8 MIR3683-201ENST00000580847 82 ntBASIC1.9□□□□□ -2.11
TDP1Q9NUW8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.9□□□□□ -2.11
TDP1Q9NUW8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TDP1Q9NUW8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 AF228730.3-201ENST00000436691 102 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 RNU6-830P-201ENST00000516353 107 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 AC112693.2-201ENST00000556538 232 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
TDP1Q9NUW8 AC106754.2-201ENST00000623006 233 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
TDP1Q9NUW8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
TDP1Q9NUW8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TDP1Q9NUW8 SNORD115-28-201ENST00000363931 81 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 MIR136-201ENST00000385207 82 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TDP1Q9NUW8 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
TDP1Q9NUW8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNY1P11-201ENST00000363759 113 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNA5SP259-201ENST00000365541 109 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNU6-187P-201ENST00000384139 106 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 MIR569-201ENST00000385228 96 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 SNORD77.3-201ENST00000391113 65 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNU4-57P-201ENST00000515980 135 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 RNU6-917P-201ENST00000516294 104 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.87□□□□□ -2.11
TDP1Q9NUW8 AC015688.6-201ENST00000577737 104 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.87□□□□□ -2.11
TDP1Q9NUW8 MIR8081-201ENST00000611533 95 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
TDP1Q9NUW8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 MIR624-201ENST00000385217 97 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 RNA5SP127-201ENST00000411051 133 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 SNORA18.4-201ENST00000516440 124 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 MIR548X2-201ENST00000579776 100 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 FAM106DP-201ENST00000586416 501 ntBASIC1.86□□□□□ -2.11
TDP1Q9NUW8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
TDP1Q9NUW8 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 MIR513C-201ENST00000401352 84 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 RNU6-938P-201ENST00000411285 103 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 RNU7-197P-201ENST00000458836 62 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 AC092991.1-201ENST00000477176 376 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 SNORA25.12-201ENST00000516202 82 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
TDP1Q9NUW8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TDP1Q9NUW8 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 SNORA17.3-201ENST00000391159 129 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 AC087499.4-201ENST00000448505 178 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 snoU13.9-201ENST00000458927 103 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
TDP1Q9NUW8 MIR376A2-201ENST00000636782 80 ntBASIC1.84□□□□□ -2.11
TDP1Q9NUW8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TDP1Q9NUW8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.83□□□□□ -2.12
TDP1Q9NUW8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.83□□□□□ -2.12
TDP1Q9NUW8 MIR653-201ENST00000385279 96 ntBASIC1.83□□□□□ -2.12
TDP1Q9NUW8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TDP1Q9NUW8 U8.17-201ENST00000391292 132 ntBASIC1.83□□□□□ -2.12
TDP1Q9NUW8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.83□□□□□ -2.12
TDP1Q9NUW8 RNU6-426P-201ENST00000516464 97 ntBASIC1.83□□□□□ -2.12
TDP1Q9NUW8 RNU7-181P-201ENST00000517234 74 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms