Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 Y_RNA.290-201ENST00000364879 114 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU1-138P-201ENST00000384093 164 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU6-482P-201ENST00000391068 107 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU6-972P-201ENST00000391208 107 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 U8.17-201ENST00000391292 132 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU2-48P-201ENST00000410694 191 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RPS15AP28-201ENST00000435088 386 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 SNRPGP14-201ENST00000435400 219 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.96□□□□□ -1.94
ATG3Q9NT62 SNORA4.4-201ENST00000515921 135 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU6-1146P-201ENST00000516282 102 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU2-35P-201ENST00000516446 142 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 AC015726.2-201ENST00000620112 122 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ATG3Q9NT62 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
ATG3Q9NT62 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
ATG3Q9NT62 MIR6073-201ENST00000352083 89 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 SNORA1B-201ENST00000362535 133 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 Y_RNA.37-201ENST00000362606 108 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 snoU2-30.2-201ENST00000362805 70 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 DEFA7P-201ENST00000382676 285 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 Y_RNA.410-201ENST00000383992 113 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 MIR759-201ENST00000390224 91 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 AL023284.1-201ENST00000403956 276 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG3Q9NT62 RNA5SP395-201ENST00000516567 118 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 SNORA31.15-201ENST00000516771 132 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 RNU6-341P-201ENST00000516973 96 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 U4atac.1-201ENST00000618345 95 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 AC025521.1-201ENST00000621624 286 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 AC018630.2-201ENST00000534866 2403 ntBASIC2.95□□□□□ -1.94
ATG3Q9NT62 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATG3Q9NT62 RNY3P2-201ENST00000362918 102 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 Y_RNA.440-201ENST00000384120 114 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 RNU6-1124P-201ENST00000384169 107 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 RNY1P6-201ENST00000384193 109 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 Y_RNA.547-201ENST00000384654 119 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 MIR221-201ENST00000385135 110 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 RPL39P25-201ENST00000449384 154 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 HMGN2P23-201ENST00000456759 269 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 RNA5SP402-201ENST00000517148 110 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 DEFB131E-201ENST00000532329 154 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 AC007229.1-201ENST00000590455 412 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 FAM71BP1-201ENST00000604431 523 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 AL137847.3-201ENST00000611521 109 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 AC006441.5-201ENST00000612680 209 ntBASIC2.94□□□□□ -1.94
ATG3Q9NT62 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG3Q9NT62 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.94□□□□□ -1.94
ATG3Q9NT62 AC131280.1-202ENST00000624067 4211 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATG3Q9NT62 MIR21-201ENST00000362134 72 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6-268P-201ENST00000364174 107 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6-816P-201ENST00000390914 107 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6-1268P-201ENST00000391214 107 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6-1239P-201ENST00000391310 107 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 SCARNA23-201ENST00000516060 130 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6-1041P-201ENST00000516254 102 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 MIR4305-201ENST00000583252 102 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 AC087685.1-201ENST00000587507 141 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 ICE2P2-201ENST00000483823 2787 ntBASIC2.93□□□□□ -1.94
ATG3Q9NT62 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATG3Q9NT62 RNU6-1099P-201ENST00000363533 107 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 SNORD115-28-201ENST00000363931 81 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 MIR1255A-201ENST00000408338 113 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 AL353689.1-201ENST00000438895 199 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 AL358944.1-201ENST00000528537 144 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 MIR3163-201ENST00000581592 73 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 MIR338-201ENST00000636369 67 ntBASIC2.92□□□□□ -1.94
ATG3Q9NT62 AC092881.1-201ENST00000638218 2733 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.91□□□□□ -1.94
ATG3Q9NT62 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATG3Q9NT62 RNU1-133P-201ENST00000364867 167 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 RNU1-131P-201ENST00000458943 161 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 AL049830.1-201ENST00000468034 425 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG3Q9NT62 RNU7-61P-201ENST00000515897 61 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 SNORA31.4-201ENST00000516049 129 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 SNORA31.11-201ENST00000516528 139 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 RNU7-6P-201ENST00000516845 62 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 MIR548Z-201ENST00000584743 97 ntBASIC2.91□□□□□ -1.94
ATG3Q9NT62 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ATG3Q9NT62 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.91□□□□□ -1.94
ATG3Q9NT62 RNA5SP181-201ENST00000410246 98 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AC022137.1-201ENST00000483735 151 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AC113410.1-201ENST00000505029 247 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 RNU6-548P-201ENST00000517083 115 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AC022254.1-201ENST00000567857 235 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AL359075.3-201ENST00000613288 217 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AC012531.4-201ENST00000616509 177 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 AC087741.2-201ENST00000619415 172 ntBASIC2.9□□□□□ -1.95
ATG3Q9NT62 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
ATG3Q9NT62 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATG3Q9NT62 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms