Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNU6-918P-201ENST00000391219 106 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 SNORA26-201ENST00000391286 122 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 RNU2-70P-201ENST00000410718 179 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 AC108667.1-201ENST00000428618 249 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 RNA5SP153-201ENST00000516498 76 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 RNU7-25P-201ENST00000516544 62 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
HINT3Q9NQE9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HINT3Q9NQE9 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 RNU6-47P-201ENST00000383866 107 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 SNORD24-201ENST00000383884 75 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 RNU4-70P-201ENST00000384579 139 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 SNORA17.3-201ENST00000391159 129 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 U8.17-201ENST00000391292 132 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 RNU4-57P-201ENST00000515980 135 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 AC109810.1-201ENST00000534066 224 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 AC108706.1-201ENST00000611053 297 ntBASIC1.31□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU6-1020P-201ENST00000363684 107 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.257-201ENST00000364596 102 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 SNORD61-201ENST00000384252 73 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AL121914.1-201ENST00000450188 156 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU6-693P-201ENST00000516134 107 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU7-43P-201ENST00000516554 64 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU6-504P-201ENST00000516568 104 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 RNU6-197P-201ENST00000516680 100 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AC007751.1-201ENST00000529260 376 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AC097639.2-201ENST00000603159 172 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
HINT3Q9NQE9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HINT3Q9NQE9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU6-888P-201ENST00000363010 101 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU6-200P-201ENST00000364743 107 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR548A2-201ENST00000384956 97 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR518F-201ENST00000384973 87 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR520C-201ENST00000385005 87 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 SNORD28B-201ENST00000390993 75 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 SNORA79-201ENST00000408376 140 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU4-43P-201ENST00000410628 137 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 RNU7-181P-201ENST00000517234 74 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR4764-201ENST00000580680 88 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR548AR-201ENST00000582191 57 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
HINT3Q9NQE9 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
HINT3Q9NQE9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HINT3Q9NQE9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
HINT3Q9NQE9 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 RNU6-138P-201ENST00000515952 107 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 MIR3192-201ENST00000584920 77 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
HINT3Q9NQE9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 SNORD115-28-201ENST00000363931 81 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 RNU6-275P-201ENST00000364910 107 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 RNU6-847P-201ENST00000411115 108 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
HINT3Q9NQE9 AL138752.1-201ENST00000452964 351 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.27□□□□□ -2.21
HINT3Q9NQE9 U6.106-201ENST00000636360 105 ntBASIC1.27□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.26□□□□□ -2.21
HINT3Q9NQE9 RNU7-41P-201ENST00000515917 61 ntBASIC1.26□□□□□ -2.21
HINT3Q9NQE9 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
HINT3Q9NQE9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 BTF3P4-201ENST00000418852 495 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 AL603825.1-201ENST00000438481 80 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 snoU13.25-201ENST00000458945 104 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 AC022559.1-201ENST00000520905 205 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
HINT3Q9NQE9 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms