Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 RN7SKP164-201ENST00000516138 266 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 RNU7-43P-201ENST00000516554 64 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
LHX9Q9NQ69 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.67□□□□□ -2.3
LHX9Q9NQ69 AC087685.1-201ENST00000587507 141 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 AL049861.1-201ENST00000603130 150 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 Pinc.1-201ENST00000616452 154 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
LHX9Q9NQ69 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
LHX9Q9NQ69 Y_RNA.152-201ENST00000363578 100 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 Y_RNA.276-201ENST00000364732 109 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 RNU6-326P-201ENST00000365480 107 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 RNU6-639P-201ENST00000384074 107 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AC005534.2-201ENST00000431047 433 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 RNU7-90P-201ENST00000459216 62 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AP003716.2-201ENST00000528260 108 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 MIR5692C2-201ENST00000577959 77 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 RN7SL793P-201ENST00000583259 296 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AC044792.1-201ENST00000593294 196 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AC037487.3-201ENST00000606668 112 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AL008718.3-201ENST00000610217 321 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 AC008133.2-201ENST00000624540 351 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.66□□□□□ -2.3
LHX9Q9NQ69 snoU18.1-201ENST00000629629 71 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 MIR4251-201ENST00000635819 61 ntBASIC0.66□□□□□ -2.3
LHX9Q9NQ69 Y_RNA.572-201ENST00000384757 98 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 U8.17-201ENST00000391292 132 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 MIR1302-7-201ENST00000408841 72 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 MTATP8P1-201ENST00000467115 207 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 SNORA27.4-201ENST00000516650 95 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 AC012433.1-201ENST00000588916 398 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 AC022140.2-201ENST00000623500 188 ntBASIC0.65□□□□□ -2.31
LHX9Q9NQ69 MIR367-201ENST00000362299 68 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.14-201ENST00000362415 103 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.117-201ENST00000363294 101 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.217-201ENST00000364214 105 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU6-654P-201ENST00000364373 107 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU6-144P-201ENST00000383951 107 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU6-1227P-201ENST00000383981 107 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNA5SP95-201ENST00000410319 137 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 AL731563.1-201ENST00000442202 214 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.641-201ENST00000459414 105 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 SERF1AP1-201ENST00000514575 187 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU6-1338P-201ENST00000516328 91 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU7-25P-201ENST00000516544 62 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNU7-149P-201ENST00000516739 59 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 AP003072.1-201ENST00000531740 145 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 MIR4724-201ENST00000579485 89 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 AC006441.5-201ENST00000612680 209 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
LHX9Q9NQ69 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 SNORD114-24-201ENST00000365029 72 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 RNU6-1203P-201ENST00000410703 110 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 RNU4-57P-201ENST00000515980 135 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 RNU6-1143P-201ENST00000516125 104 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.666-201ENST00000516187 112 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 RNU6-830P-201ENST00000516353 107 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.63□□□□□ -2.31
LHX9Q9NQ69 RNU6-94P-201ENST00000607728 107 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 AL021707.8-201ENST00000609428 183 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 uc_338.4-201ENST00000616635 176 ntBASIC0.63□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.24-201ENST00000362508 103 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 RNU6-238P-201ENST00000363313 106 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 RNU6-211P-201ENST00000384047 107 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 RNY1P4-201ENST00000384595 115 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.547-201ENST00000384654 119 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.587-201ENST00000391210 103 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 MIR548O-201ENST00000408583 114 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 RNU6-651P-201ENST00000411040 105 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.62□□□□□ -2.31
LHX9Q9NQ69 MTND4LP30-201ENST00000454092 297 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 AC023449.1-201ENST00000454464 154 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 MIR6516-201ENST00000630554 81 ntBASIC0.62□□□□□ -2.31
LHX9Q9NQ69 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.11-201ENST00000362375 109 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.237-201ENST00000364439 102 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.370-201ENST00000365589 108 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.376-201ENST00000365638 108 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.486-201ENST00000384398 107 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 SNORA51.10-201ENST00000384418 136 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 RNU6-1289P-201ENST00000384431 106 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 Y_RNA.494-201ENST00000384432 111 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 MIR200A-201ENST00000384875 90 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 MIR605-201ENST00000385078 83 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 RNU6-1109P-201ENST00000391187 107 ntBASIC0.61□□□□□ -2.31
LHX9Q9NQ69 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms