Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 MIR3179-4-201ENST00000617599 84 ntBASIC-1.38□□□□□ -2.63
MRPL40Q9NQ50 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 RNA5SP192-201ENST00000364404 120 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 RNU6-901P-201ENST00000384593 106 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AL606923.1-201ENST00000406616 190 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AL356010.1-201ENST00000456364 102 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 SNORA19.2-201ENST00000516013 114 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 RNU6-966P-201ENST00000516479 104 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 MIR4424-201ENST00000585257 86 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AL356055.1-201ENST00000602528 446 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AC008536.2-201ENST00000607284 349 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 AL138960.2-201ENST00000625145 535 ntBASIC-1.39□□□□□ -2.63
MRPL40Q9NQ50 RNY1P16-201ENST00000363063 111 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 RNU4-75P-201ENST00000364621 146 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 MIR517B-201ENST00000385102 67 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 USP9YP30-201ENST00000430729 455 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 SNORA13-201ENST00000458790 133 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 MIR4473-201ENST00000583731 91 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 MIR548AB-201ENST00000584917 84 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 AC011373.1-201ENST00000607270 237 ntBASIC-1.4□□□□□ -2.63
MRPL40Q9NQ50 RNU6-500P-201ENST00000362349 107 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNU6-502P-201ENST00000362419 108 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNU6-181P-201ENST00000363225 107 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNU6-24P-201ENST00000384440 107 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNU6-192P-201ENST00000391253 100 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 AL031003.1-201ENST00000404229 172 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 SCARNA18B-201ENST00000458806 135 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNU6-445P-201ENST00000516949 107 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 MIR3165-201ENST00000579874 75 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 MIR7844-201ENST00000616161 122 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 AC073534.2-201ENST00000620377 381 ntBASIC-1.41□□□□□ -2.64
MRPL40Q9NQ50 RNA5SP403-201ENST00000363598 108 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 RNU6-82P-201ENST00000363970 107 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 MIR539-201ENST00000365690 78 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 RNU6-900P-201ENST00000384498 102 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 MIR181B2-201ENST00000385004 89 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 RNU2-61P-201ENST00000411069 191 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 EIF1P2-201ENST00000428233 350 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.42□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 RNU6-702P-201ENST00000364982 107 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 RNU6-996P-201ENST00000365438 107 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 RNU6-601P-201ENST00000384540 107 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 AC073415.1-201ENST00000449240 153 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 RN7SKP19-201ENST00000516016 252 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 AL118558.2-201ENST00000556294 238 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 MIR5696-201ENST00000578474 85 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 AC245014.2-201ENST00000603689 287 ntBASIC-1.43□□□□□ -2.64
MRPL40Q9NQ50 RNU6-509P-201ENST00000363519 107 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 USMG5P1-201ENST00000425964 177 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 CHEK2P4-201ENST00000450340 246 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 SNORD22.1-201ENST00000516331 125 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 AC040926.1-201ENST00000530195 238 ntBASIC-1.44□□□□□ -2.64
MRPL40Q9NQ50 RNU4-16P-201ENST00000364737 141 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 RNU6-597P-201ENST00000365620 102 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 RNU6-431P-201ENST00000383874 107 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 MIR518B-201ENST00000385127 83 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 SNORD64-201ENST00000386683 67 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 MIR548O-201ENST00000408583 114 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 BX295541.1-201ENST00000417774 250 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 snoU13.13-201ENST00000458842 104 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 AC022137.1-201ENST00000483735 151 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 AP000676.1-201ENST00000533307 52 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 AL021368.1-201ENST00000607490 540 ntBASIC-1.45□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 SNORA40.5-201ENST00000391061 128 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 MIR1207-201ENST00000408249 87 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 RNA5SP261-201ENST00000410536 106 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 RNU7-63P-201ENST00000459054 62 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 RPS29P24-201ENST00000486345 171 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 SNORA40.9-201ENST00000515895 93 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 ACA59.1-201ENST00000515966 143 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AC141846.1-201ENST00000568348 142 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AC073648.5-201ENST00000603502 305 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AL022161.1-201ENST00000604390 213 ntBASIC-1.46□□□□□ -2.64
MRPL40Q9NQ50 AC004467.1-201ENST00000615678 330 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms