Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 Y_RNA.510-201ENST00000384511 114 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 RNU6-240P-201ENST00000516098 97 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 RNA5SP437-201ENST00000517249 129 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 U6.95-201ENST00000636931 70 ntBASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NRIP3Q9NQ35 AL442644.1-201ENST00000454390 3105 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 Y_RNA.37-201ENST00000362606 108 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 RNU6-755P-201ENST00000364400 103 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 RNU6-147P-201ENST00000383983 107 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 Y_RNA.549-201ENST00000384657 102 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 RNU7-94P-201ENST00000459576 63 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 MIR3613-201ENST00000579844 87 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 MIR4672-201ENST00000583126 81 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 AC087685.1-201ENST00000587507 141 ntBASIC1.85□□□□□ -2.11
NRIP3Q9NQ35 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 RNU6-1084P-201ENST00000362498 107 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 Y_RNA.265-201ENST00000364677 108 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 SNORD116-21-201ENST00000384507 92 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 MIR548A3-201ENST00000385297 97 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 U8.16-201ENST00000391279 133 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 RNU6-126P-201ENST00000516685 103 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NRIP3Q9NQ35 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NRIP3Q9NQ35 RNU6-349P-201ENST00000362402 107 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 SNORD115-28-201ENST00000363931 81 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 SNORD14E-201ENST00000364009 85 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 SNORA63D-201ENST00000364359 132 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 snoU2-30.1-201ENST00000365012 70 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 RNU6-442P-201ENST00000383968 104 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 Y_RNA.440-201ENST00000384120 114 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 AL356320.1-201ENST00000429616 163 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 Y_RNA.649-201ENST00000459077 103 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 IGKV3-31-201ENST00000523109 329 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 AL035470.1-201ENST00000622571 220 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 MIR6873-201ENST00000622788 63 ntBASIC1.83□□□□□ -2.12
NRIP3Q9NQ35 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 SNORA2.2-201ENST00000365473 135 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 Y_RNA.528-201ENST00000384575 108 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RNA5SP482-201ENST00000391269 118 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RNA5SP100-201ENST00000410903 110 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RNA5SP59-201ENST00000410922 110 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 uc_338.28-201ENST00000612082 187 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 AC134878.1-201ENST00000619901 243 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 AL121890.5-201ENST00000620848 304 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
NRIP3Q9NQ35 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 RNU6-1104P-201ENST00000384723 104 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 AC093850.1-201ENST00000454121 251 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 AL137067.1-201ENST00000615933 120 ntBASIC1.81□□□□□ -2.12
NRIP3Q9NQ35 MIR450A1-201ENST00000362262 91 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 RNU6-424P-201ENST00000384367 105 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 MIR802-201ENST00000390235 94 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 RNU11-5P-201ENST00000391216 129 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 AL023284.1-201ENST00000403956 276 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 MTATP6P21-201ENST00000440681 189 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 RNA5SP168-201ENST00000516642 112 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 RNY4P20-201ENST00000516678 93 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 AP003484.1-201ENST00000530974 250 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
NRIP3Q9NQ35 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 RNU4-82P-201ENST00000362443 140 ntBASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 RNU4-16P-201ENST00000364737 141 ntBASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 RNU6-163P-201ENST00000384396 106 ntBASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
NRIP3Q9NQ35 RNA5SP89-201ENST00000410300 108 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms