Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC087499.4-201ENST00000448505 178 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 AC015688.6-201ENST00000577737 104 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 AL365205.2-201ENST00000594586 68 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 MIR502-201ENST00000606349 86 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 WWP1P1-201ENST00000466609 2769 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 Y_RNA.91-201ENST00000363042 107 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-978P-201ENST00000364371 103 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-1292P-201ENST00000383856 107 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-1062P-201ENST00000383908 107 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-449P-201ENST00000383914 107 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-439P-201ENST00000384188 106 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 MIR653-201ENST00000385279 96 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 MIR548O-201ENST00000408583 114 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.98□□□□□ -2.09
VTA1Q9NP79 RNU6-693P-201ENST00000516134 107 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
VTA1Q9NP79 DNAJC19P2-201ENST00000593340 302 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 AC134878.1-201ENST00000619901 243 ntBASIC1.98□□□□□ -2.09
VTA1Q9NP79 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
VTA1Q9NP79 ICE2P2-201ENST00000483823 2787 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 MIR378A-201ENST00000362177 66 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 Y_RNA.410-201ENST00000383992 113 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 SNORD61-201ENST00000384252 73 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.97□□□□□ -2.09
VTA1Q9NP79 AC074198.2-201ENST00000508153 258 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 Y_RNA.666-201ENST00000516187 112 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 AC090049.2-201ENST00000550377 109 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.97□□□□□ -2.09
VTA1Q9NP79 MIR4778-201ENST00000577635 80 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 AL513534.2-201ENST00000603836 250 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 snoU13.31-201ENST00000607291 104 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 AC095038.3-201ENST00000634439 195 ntBASIC1.97□□□□□ -2.09
VTA1Q9NP79 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VTA1Q9NP79 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VTA1Q9NP79 Y_RNA.4-201ENST00000362333 112 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 SNORA1.2-201ENST00000365189 134 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 RNA5SP259-201ENST00000365541 109 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 SUMO2P16-201ENST00000519475 264 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 MIR3144-201ENST00000579460 79 ntBASIC1.96□□□□□ -2.1
VTA1Q9NP79 SNORD115-28-201ENST00000363931 81 ntBASIC1.95□□□□□ -2.1
VTA1Q9NP79 SNORA75.5-201ENST00000391291 81 ntBASIC1.95□□□□□ -2.1
VTA1Q9NP79 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
VTA1Q9NP79 AC093850.1-201ENST00000454121 251 ntBASIC1.95□□□□□ -2.1
VTA1Q9NP79 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
VTA1Q9NP79 Y_RNA.547-201ENST00000384654 119 ntBASIC1.94□□□□□ -2.1
VTA1Q9NP79 RNU6-1067P-201ENST00000384752 107 ntBASIC1.94□□□□□ -2.1
VTA1Q9NP79 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
VTA1Q9NP79 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
VTA1Q9NP79 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
VTA1Q9NP79 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VTA1Q9NP79 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VTA1Q9NP79 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VTA1Q9NP79 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 AL451046.2-201ENST00000403074 277 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 RNU7-25P-201ENST00000516544 62 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 MIR4422-201ENST00000581938 83 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 AL357312.1-201ENST00000603879 298 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 AC015726.2-201ENST00000620112 122 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.93□□□□□ -2.1
VTA1Q9NP79 MIR6844-201ENST00000637122 62 ntBASIC1.93□□□□□ -2.1
VTA1Q9NP79 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
VTA1Q9NP79 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 MIR548A2-201ENST00000384956 97 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 MIR624-201ENST00000385217 97 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 RNA5SP127-201ENST00000411051 133 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 AC079140.2-201ENST00000506193 142 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
VTA1Q9NP79 AC007751.1-201ENST00000529260 376 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 Y_RNA.778-201ENST00000620203 90 ntBASIC1.92□□□□□ -2.1
VTA1Q9NP79 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
VTA1Q9NP79 RNY1P5-201ENST00000383890 115 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 RNU1-78P-201ENST00000391248 165 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 AC245517.4-201ENST00000448601 281 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 AC107297.1-201ENST00000459991 176 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 RNU4-57P-201ENST00000515980 135 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 RNU6-1270P-201ENST00000517128 108 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 FAM106DP-201ENST00000586416 501 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 AC104465.1-201ENST00000611365 139 ntBASIC1.91□□□□□ -2.1
VTA1Q9NP79 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VTA1Q9NP79 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VTA1Q9NP79 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
VTA1Q9NP79 Y_RNA.37-201ENST00000362606 108 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 Y_RNA.164-201ENST00000363709 102 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 RNU6-768P-201ENST00000384683 107 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 MIR526A1-201ENST00000384897 85 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 U8.17-201ENST00000391292 132 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 AP1B1P2-201ENST00000416196 106 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 SNX2P2-201ENST00000424553 323 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 RNU7-43P-201ENST00000516554 64 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms