Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CD248Q9HCU0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CD248Q9HCU0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD248Q9HCU0 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 Y_RNA.388-201ENST00000383919 113 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR504-201ENST00000385065 83 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR522-201ENST00000385071 87 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR548O-201ENST00000408583 114 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU6-237P-201ENST00000515985 71 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU1-142P-201ENST00000516682 145 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU6-762P-201ENST00000517107 102 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR4287-201ENST00000579398 78 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.38□□□□□ -2.03
CD248Q9HCU0 MIR338-201ENST00000636369 67 ntBASIC2.38□□□□□ -2.03
CD248Q9HCU0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD248Q9HCU0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CD248Q9HCU0 RNU2-48P-201ENST00000410694 191 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AL353689.1-201ENST00000438895 199 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 RNU7-70P-201ENST00000516941 66 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AC068339.1-201ENST00000526965 141 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AP002004.2-201ENST00000531656 154 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
CD248Q9HCU0 MIR5009-201ENST00000578736 100 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 MIR4448-201ENST00000584360 86 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AL096840.1-201ENST00000603287 93 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 AC021443.1-201ENST00000604478 211 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.37□□□□□ -2.03
CD248Q9HCU0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.37□□□□□ -2.03
CD248Q9HCU0 AL596211.1-201ENST00000569873 2277 ntBASIC2.37□□□□□ -2.03
CD248Q9HCU0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CD248Q9HCU0 SNORA1B-201ENST00000362535 133 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 RNU6-442P-201ENST00000383968 104 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 MIR590-201ENST00000385008 97 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 RNA5SP323-201ENST00000391094 133 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 RNU6-109P-201ENST00000516364 107 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 RNU6-184P-201ENST00000516514 107 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.36□□□□□ -2.03
CD248Q9HCU0 U6.108-201ENST00000637764 58 ntBASIC2.36□□□□□ -2.03
CD248Q9HCU0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
CD248Q9HCU0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CD248Q9HCU0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CD248Q9HCU0 RNU6-349P-201ENST00000362402 107 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 SNORD68-201ENST00000363214 84 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 SNORD115-28-201ENST00000363931 81 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 SNORD14E-201ENST00000364009 85 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 MIR488-201ENST00000365739 83 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 U8.17-201ENST00000391292 132 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 RNU7-94P-201ENST00000459576 63 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.35□□□□□ -2.03
CD248Q9HCU0 RNU6-830P-201ENST00000516353 107 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 RNU7-25P-201ENST00000516544 62 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 SUMO2P16-201ENST00000519475 264 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
CD248Q9HCU0 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 Y_RNA.818-201ENST00000618813 71 ntBASIC2.35□□□□□ -2.03
CD248Q9HCU0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CD248Q9HCU0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 RNU7-164P-201ENST00000459221 62 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
CD248Q9HCU0 RNU6-667P-201ENST00000517186 102 ntBASIC2.34□□□□□ -2.03
CD248Q9HCU0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
CD248Q9HCU0 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 Y_RNA.78-201ENST00000362970 110 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 SNORA33-201ENST00000363664 130 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 RNU1-133P-201ENST00000364867 167 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 RNY1P6-201ENST00000384193 109 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 MT-TI-201ENST00000387365 69 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 SNORA19.1-201ENST00000410656 129 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 RPS3AP1-201ENST00000413190 320 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.33□□□□□ -2.04
CD248Q9HCU0 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.33□□□□□ -2.04
CD248Q9HCU0 AC141557.1-201ENST00000540982 400 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CD248Q9HCU0 AC084364.2-201ENST00000546924 395 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
CD248Q9HCU0 AL442128.1-201ENST00000615151 90 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 MIR2052-201ENST00000636055 55 ntBASIC2.33□□□□□ -2.04
CD248Q9HCU0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CD248Q9HCU0 RNU6-268P-201ENST00000364174 107 ntBASIC2.32□□□□□ -2.04
CD248Q9HCU0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.32□□□□□ -2.04
CD248Q9HCU0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.32□□□□□ -2.04
CD248Q9HCU0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.32□□□□□ -2.04
CD248Q9HCU0 MIR515-2-201ENST00000384883 83 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms