Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
PCDH9Q9HC56 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 RNU6-365P-201ENST00000517113 106 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 MIR4662B-201ENST00000579498 81 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 AC072026.1-201ENST00000605023 201 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
PCDH9Q9HC56 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PCDH9Q9HC56 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.242-201ENST00000364473 110 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.634-201ENST00000364811 113 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 RNU6-484P-201ENST00000384016 107 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.785-201ENST00000384290 109 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 RNU2-55P-201ENST00000411146 174 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 AC006461.1-201ENST00000412637 326 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 RNU6-693P-201ENST00000516134 107 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 Y_RNA.700-201ENST00000516806 100 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 RNU6-1270P-201ENST00000517128 108 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 AL512598.1-201ENST00000610158 273 ntBASIC1.41□□□□□ -2.18
PCDH9Q9HC56 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PCDH9Q9HC56 RNU6-275P-201ENST00000364910 107 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 MIR136-201ENST00000385207 82 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 RNU7-120P-201ENST00000459334 63 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 RNU7-25P-201ENST00000516544 62 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 SNORA18.7-201ENST00000516910 131 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 AC006441.5-201ENST00000612680 209 ntBASIC1.4□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.75-201ENST00000362927 97 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 SNORA2.2-201ENST00000365473 135 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.435-201ENST00000384095 112 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 SNORD61-201ENST00000384252 73 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 RNU6-907P-201ENST00000390924 102 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 MIR548O-201ENST00000408583 114 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 SEPT7P4-201ENST00000437076 306 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 RNU6-322P-201ENST00000516010 103 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.662-201ENST00000516028 97 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 RNU6-504P-201ENST00000516568 104 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 RNU6-197P-201ENST00000516680 100 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 MRPS18CP4-201ENST00000535821 231 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
PCDH9Q9HC56 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.150-201ENST00000363562 102 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 RNU6-682P-201ENST00000363843 106 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 SNORA26-201ENST00000391286 122 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 SNX2P2-201ENST00000424553 323 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 AC074198.2-201ENST00000508153 258 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 RNA5SP153-201ENST00000516498 76 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 RNU6-126P-201ENST00000516685 103 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 DNAJC19P9-201ENST00000555084 351 ntBASIC1.38□□□□□ -2.19
PCDH9Q9HC56 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PCDH9Q9HC56 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PCDH9Q9HC56 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.37□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.270-201ENST00000364693 104 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.357-201ENST00000365487 109 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 RNU6-643P-201ENST00000384018 107 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.547-201ENST00000384654 119 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.37□□□□□ -2.19
PCDH9Q9HC56 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PCDH9Q9HC56 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.23-201ENST00000362496 106 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 RNU6-312P-201ENST00000364629 107 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.338-201ENST00000365320 114 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.521-201ENST00000384560 114 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 RNU1-78P-201ENST00000391248 165 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 BTF3P4-201ENST00000418852 495 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.36□□□□□ -2.19
PCDH9Q9HC56 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 AC007751.1-201ENST00000529260 376 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.36□□□□□ -2.19
PCDH9Q9HC56 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
PCDH9Q9HC56 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
PCDH9Q9HC56 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.66-201ENST00000362862 102 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 SNORD41-201ENST00000386967 70 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 U8.17-201ENST00000391292 132 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 RNU4-43P-201ENST00000410628 137 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 MIR4431-201ENST00000579990 94 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 MIR378D2-201ENST00000580636 98 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 AC097639.2-201ENST00000603159 172 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 AL513534.2-201ENST00000603836 250 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 AC104465.1-201ENST00000611365 139 ntBASIC1.35□□□□□ -2.19
PCDH9Q9HC56 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
PCDH9Q9HC56 SNORD115-28-201ENST00000363931 81 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 Y_RNA.240-201ENST00000364469 95 ntBASIC1.34□□□□□ -2.19
PCDH9Q9HC56 SNORA1-201ENST00000384107 130 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms