Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MIR3129-201ENST00000581095 76 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 AC021506.2-201ENST00000612354 169 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 AP001340.1-201ENST00000624405 217 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.420-201ENST00000384043 110 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 MIR548A2-201ENST00000384956 97 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 MIR624-201ENST00000385217 97 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-460P-201ENST00000391158 108 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 RNA5SP127-201ENST00000411051 133 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 MTND4LP9-201ENST00000427694 174 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 AC131055.1-201ENST00000584626 316 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 AC134878.1-201ENST00000619901 243 ntBASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
AMBRA1Q9C0C7 SNORD38C-201ENST00000384381 69 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 MIR518F-201ENST00000384973 87 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 MIR548O-201ENST00000408583 114 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AF228730.3-201ENST00000436691 102 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 MIR4498-201ENST00000577599 66 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
AMBRA1Q9C0C7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 SNORD113-1-201ENST00000365321 69 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 SNORD77.3-201ENST00000391113 65 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 AC015922.2-201ENST00000435593 184 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 AC099513.1-201ENST00000490423 301 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 RNU7-25P-201ENST00000516544 62 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 AP001328.1-201ENST00000528550 176 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 TUG1_4.1-201ENST00000619464 181 ntBASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
AMBRA1Q9C0C7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 SNORD115-28-201ENST00000363931 81 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 SNORD18B-201ENST00000365659 72 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-959P-201ENST00000384671 107 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-830P-201ENST00000516353 107 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
AMBRA1Q9C0C7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-915P-201ENST00000364943 103 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 MIR4781-201ENST00000585250 76 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 MIR539-201ENST00000365690 78 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 MIR660-201ENST00000385235 97 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-1211P-201ENST00000459179 105 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
AMBRA1Q9C0C7 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-1117P-201ENST00000384525 104 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 MIR452-201ENST00000385020 85 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 AC087499.4-201ENST00000448505 178 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 MIR4778-201ENST00000577635 80 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 MIR4287-201ENST00000579398 78 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
AMBRA1Q9C0C7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 U8.1-201ENST00000362843 134 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 AL603914.1-201ENST00000401964 204 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.82□□□□□ -2.12
AMBRA1Q9C0C7 RNU6-971P-201ENST00000516920 106 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms