Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC055731.1-201ENST00000474387 401 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RN7SL499P-201ENST00000481141 276 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RNU6-917P-201ENST00000516294 104 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RNU6-109P-201ENST00000516364 107 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RNU6-184P-201ENST00000516514 107 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RNU7-193P-201ENST00000516723 65 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 RNU7-35P-201ENST00000517174 62 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 PARP1P2-201ENST00000556806 195 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 MIR4286-201ENST00000580651 93 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 MIR4764-201ENST00000580680 88 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 AC096720.1-201ENST00000604441 183 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 U6.90-201ENST00000614007 104 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 U6.70-201ENST00000620287 104 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 AP000346.3-201ENST00000622821 210 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 MIR1255B1-201ENST00000636325 63 ntBASIC0.82□□□□□ -2.28
LCE3DQ9BYE3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RNU6-170P-201ENST00000362832 104 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 Y_RNA.95-201ENST00000363079 95 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 SNORD115-35-201ENST00000365122 82 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RNU6-820P-201ENST00000384273 107 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RNU6-616P-201ENST00000384353 107 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 SNORA18-201ENST00000384416 132 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 SNORD15B-201ENST00000384714 146 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 AL451046.2-201ENST00000403074 277 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 SNORA11.5-201ENST00000408163 128 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 AC004965.1-201ENST00000413033 213 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 AL445685.2-201ENST00000422551 342 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 CYCSP4-201ENST00000429682 331 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 JTBP1-201ENST00000441314 247 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RNU7-45P-201ENST00000459460 63 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 AC091153.1-201ENST00000466297 402 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RPS29P22-201ENST00000472363 168 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 RN7SL20P-201ENST00000488827 297 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 Y_RNA.705-201ENST00000516862 110 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 MIR2116-201ENST00000517221 80 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 IGKV2-26-201ENST00000518305 343 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 AC107016.2-201ENST00000547968 190 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 MIR5685-201ENST00000579080 79 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 MIR6716-201ENST00000613413 80 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 MIR6729-201ENST00000618194 65 ntBASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
LCE3DQ9BYE3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORD114-10-201ENST00000363409 72 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNU6-457P-201ENST00000363999 107 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORD73B-201ENST00000364394 72 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AL359837.1-201ENST00000381357 287 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR520C-201ENST00000385005 87 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR450A2-201ENST00000385022 100 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORA26.2-201ENST00000390922 122 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORD17-201ENST00000390930 237 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNU6-972P-201ENST00000391208 107 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNY4P29-201ENST00000410801 97 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNU6-602P-201ENST00000411155 105 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MRPL35P3-201ENST00000421557 364 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AC025518.1-201ENST00000479856 347 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AC108729.3-201ENST00000513484 108 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RN7SKP132-201ENST00000516001 208 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORA9.3-201ENST00000516383 129 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 SNORA31.15-201ENST00000516771 132 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 CYP3A52P-201ENST00000563326 91 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR3935-201ENST00000583472 104 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR4276-201ENST00000584832 70 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AL513534.2-201ENST00000603836 250 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR6875-201ENST00000617506 72 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 MIR6733-201ENST00000635723 61 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 AC245060.5-201ENST00000610778 3293 ntBASIC0.8□□□□□ -2.28
LCE3DQ9BYE3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 MIR377-201ENST00000362145 69 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNU4-35P-201ENST00000362588 141 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNU6-525P-201ENST00000363685 104 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 SNORD116-10-201ENST00000363791 102 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 SNORD38.1-201ENST00000363863 68 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 SNORA67.1-201ENST00000364749 141 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNU6-60P-201ENST00000364792 103 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 Y_RNA.290-201ENST00000364879 114 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNA5SP283-201ENST00000365604 119 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNU6-203P-201ENST00000384038 104 ntBASIC0.79□□□□□ -2.28
LCE3DQ9BYE3 RNU6-675P-201ENST00000384236 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms