Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC007751.1-201ENST00000529260 376 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 MIR4662B-201ENST00000579498 81 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 MIR4452-201ENST00000583004 71 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 MIR5092-201ENST00000583139 88 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 AL670379.3-201ENST00000605040 251 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 JPX_2.1-201ENST00000614161 69 ntBASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LRFN3Q9BTN0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 RNU6-112P-201ENST00000363599 104 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 RNU6-647P-201ENST00000364243 107 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 MIR624-201ENST00000385217 97 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 MIR891A-201ENST00000401237 79 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP127-201ENST00000411051 133 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 AC063976.4-201ENST00000421971 163 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 FTH1P12-201ENST00000432137 551 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 RNU6-781P-201ENST00000516377 101 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 AP002004.2-201ENST00000531656 154 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 MIR3613-201ENST00000579844 87 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 AC091178.2-201ENST00000584401 117 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 AL365205.2-201ENST00000594586 68 ntBASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.2□□□□□ -2.06
LRFN3Q9BTN0 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AC245047.3-201ENST00000429428 127 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 RNU7-28P-201ENST00000516759 62 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 RNU6-365P-201ENST00000517113 106 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 SNORA28-201ENST00000606769 126 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AL773524.1-201ENST00000614065 229 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AC095038.3-201ENST00000634439 195 ntBASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.19□□□□□ -2.06
LRFN3Q9BTN0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.35-201ENST00000362601 101 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 RNU6-147P-201ENST00000383983 107 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 SNORD116-21-201ENST00000384507 92 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 MIR548A3-201ENST00000385297 97 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 RN7SKP200-201ENST00000410564 320 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.651-201ENST00000459380 103 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 RN7SKP19-201ENST00000516016 252 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 MIR4679-2-201ENST00000578358 77 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 MIR3129-201ENST00000581095 76 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 AL022345.2-201ENST00000606307 135 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRFN3Q9BTN0 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 SNORA1-201ENST00000384107 130 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 MIRLET7F2-201ENST00000385277 83 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 HMGN1P7-201ENST00000491722 313 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 RNU6-504P-201ENST00000516568 104 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 AL121890.5-201ENST00000620848 304 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
LRFN3Q9BTN0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.43-201ENST00000362670 111 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 SNORD61-201ENST00000384252 73 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 RNU6-296P-201ENST00000384608 107 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 SNORA12.1-201ENST00000390873 148 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 SNORD72-201ENST00000390994 80 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 AC233266.1-201ENST00000454518 96 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 RNA5SP170-201ENST00000517150 101 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 MIR3683-201ENST00000580847 82 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 AC242852.1-201ENST00000612151 96 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 AC244015.1-201ENST00000622301 99 ntBASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRFN3Q9BTN0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
LRFN3Q9BTN0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 SNRPGP10-201ENST00000432323 225 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 AF228730.3-201ENST00000436691 102 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms