Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 Y_RNA.416-201ENST00000384014 113 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 RNU6-211P-201ENST00000384047 107 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 RNU6-1310P-201ENST00000384153 107 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 MIR873-201ENST00000401120 77 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 HSPE1P13-201ENST00000451143 297 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 SCARNA8-201ENST00000515924 131 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 SNORA27.4-201ENST00000516650 95 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 RNU6-453P-201ENST00000516819 85 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 RNU7-172P-201ENST00000517125 64 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 AC022559.1-201ENST00000520905 205 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 BX284668.6-201ENST00000606899 438 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 MIR6079-201ENST00000635807 62 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
CDX2Q99626 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
CDX2Q99626 MIRLET7C-201ENST00000362160 84 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 SNORA1B-201ENST00000362535 133 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-1272P-201ENST00000362776 107 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 snoU2_19.4-201ENST00000364329 80 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 Y_RNA.267-201ENST00000364679 109 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 Y_RNA.275-201ENST00000364726 110 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 Y_RNA.341-201ENST00000365341 102 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-326P-201ENST00000365480 107 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 Y_RNA.368-201ENST00000365547 113 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-47P-201ENST00000383866 107 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 SNORA72.4-201ENST00000384174 132 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 MT-TT-201ENST00000387460 66 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 BTF3P11-201ENST00000426582 477 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 Z98949.2-201ENST00000440996 144 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-561P-201ENST00000516222 102 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-917P-201ENST00000516294 104 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-1271P-201ENST00000517049 105 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 RNU6-1096P-201ENST00000517089 102 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.77□□□□□ -2.29
CDX2Q99626 AC024405.2-202ENST00000532731 184 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 AC005357.1-201ENST00000588399 301 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 AC006380.1-201ENST00000603598 186 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 GHRLOS.1-201ENST00000610995 70 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 U2.14-201ENST00000615943 113 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 SNORD3E-202ENST00000627253 216 ntBASIC0.77□□□□□ -2.29
CDX2Q99626 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CDX2Q99626 Y_RNA.44-201ENST00000362676 108 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 RNU6-923P-201ENST00000364753 107 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 Y_RNA.350-201ENST00000365409 98 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 Y_RNA.363-201ENST00000365529 113 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AL162725.1-201ENST00000435405 301 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.76□□□□□ -2.29
CDX2Q99626 AC233266.1-201ENST00000454518 96 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 RNA5SP168-201ENST00000516642 112 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 RNU6-922P-201ENST00000516753 99 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC136628.3-201ENST00000521868 290 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC090049.2-201ENST00000550377 109 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC130289.1-201ENST00000577321 73 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 MIR4308-201ENST00000580634 81 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC006006.1-201ENST00000603082 144 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC242852.1-201ENST00000612151 96 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 AC244015.1-201ENST00000622301 99 ntBASIC0.76□□□□□ -2.29
CDX2Q99626 MIR335-201ENST00000362173 94 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 SNORA25.1-201ENST00000362326 128 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 Y_RNA.20-201ENST00000362479 113 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 Y_RNA.24-201ENST00000362508 103 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-199P-201ENST00000362954 107 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 Y_RNA.188-201ENST00000363952 111 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-818P-201ENST00000364837 108 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNY4P28-201ENST00000365281 93 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-376P-201ENST00000384731 106 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 MT-TR-201ENST00000387439 65 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 U8.16-201ENST00000391279 133 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 SNORD58.1-201ENST00000391313 66 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-493P-201ENST00000391321 108 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC024067.1-201ENST00000426199 223 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 CALM2P4-201ENST00000430810 426 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC245047.7-201ENST00000440265 293 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 STAG3L5P-204ENST00000443759 179 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC093850.1-201ENST00000454121 251 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 SNORD2.1-201ENST00000458762 69 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC048334.1-201ENST00000477975 159 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 NDUFA4P2-201ENST00000489989 244 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 SNORA31.2-201ENST00000516019 134 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU7-115P-201ENST00000516433 55 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 RNU6-341P-201ENST00000516973 96 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 MIR3684-201ENST00000579779 74 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 MIR4282-201ENST00000583613 67 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 POLR3GP1-201ENST00000594073 261 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 SNORA28-201ENST00000606769 126 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC141273.2-201ENST00000618989 130 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AL365265.1-201ENST00000621045 234 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 AC106754.2-201ENST00000623006 233 ntBASIC0.75□□□□□ -2.29
CDX2Q99626 UBE2WP1-201ENST00000362030 340 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 RNU6-653P-201ENST00000363074 106 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 Y_RNA.292-201ENST00000364904 97 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 RNU6-907P-201ENST00000390924 102 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 SNORD12-201ENST00000391002 90 ntBASIC0.74□□□□□ -2.29
CDX2Q99626 RNU6-1228P-201ENST00000391014 107 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 395.5 ms