Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.220-201ENST00000364244 109 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1113P-201ENST00000384348 107 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR548D2-201ENST00000384955 97 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SNX2P2-201ENST00000424553 323 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 PGBD4P5-201ENST00000445958 426 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 AL049830.1-201ENST00000468034 425 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 AC018868.1-201ENST00000491307 315 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA31.4-201ENST00000516049 129 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 AL359075.3-201ENST00000613288 217 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP1Q96SZ6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORD115-28-201ENST00000363931 81 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 RNY1P6-201ENST00000384193 109 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA8-201ENST00000384574 139 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 RNA5SP225-201ENST00000410874 135 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 AC107297.1-201ENST00000459991 176 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 CKS1BP2-201ENST00000497342 240 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-667P-201ENST00000517186 102 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1116P-201ENST00000517269 99 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR4298-201ENST00000584380 73 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR548Z-201ENST00000584743 97 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 AC134878.1-201ENST00000619901 243 ntBASIC2.32□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1134P-201ENST00000365156 101 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR95-201ENST00000385072 81 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-972P-201ENST00000391208 107 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.593-201ENST00000410292 98 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 AL445646.1-201ENST00000431784 216 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 RPL39P25-201ENST00000449384 154 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-162P-201ENST00000516228 103 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-638P-201ENST00000516582 104 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 AC026421.1-201ENST00000519101 163 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 AC006441.5-201ENST00000612680 209 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR5739-201ENST00000619803 80 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
CDK5RAP1Q96SZ6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU1-133P-201ENST00000364867 167 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.494-201ENST00000384432 111 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-816P-201ENST00000390914 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNA5SP323-201ENST00000391094 133 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1268P-201ENST00000391214 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1239P-201ENST00000391310 107 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-893P-201ENST00000458841 100 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU1-142P-201ENST00000516682 145 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU7-6P-201ENST00000516845 62 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR4305-201ENST00000583252 102 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.773-201ENST00000607168 90 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 AC015726.2-201ENST00000620112 122 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 AC091932.4-201ENST00000623386 200 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR1255B1-201ENST00000636325 63 ntBASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.290-201ENST00000364879 114 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.351-201ENST00000365436 96 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.410-201ENST00000383992 113 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR450A2-201ENST00000385022 100 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 AC003685.2-201ENST00000422795 395 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 AC113410.1-201ENST00000505029 247 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU1-41P-201ENST00000516161 162 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-795P-201ENST00000516323 103 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU1-48P-201ENST00000516400 162 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORA18.7-201ENST00000516910 131 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 AP003484.1-201ENST00000530974 250 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.818-201ENST00000618813 71 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 AC095038.3-201ENST00000634439 195 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 AL162726.3-218ENST00000636401 95 ntBASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK5RAP1Q96SZ6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms