Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR3616-201ENST00000584070 92 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNY1P6-201ENST00000384193 109 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 SNORA51.10-201ENST00000384418 136 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 AL606517.2-201ENST00000442855 241 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP281-201ENST00000516504 135 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 AC026271.5-201ENST00000577873 130 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 MIR3670-3-201ENST00000584855 65 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 MIR3670-4-201ENST00000612260 65 ntBASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SYNGAP1Q96PV0 AC016717.2-201ENST00000609089 5141 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 RNU4-16P-201ENST00000364737 141 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.369-201ENST00000365568 117 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 DEFA7P-201ENST00000382676 285 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 AC099677.2-201ENST00000436385 175 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP456-201ENST00000364002 114 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.362-201ENST00000365518 110 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.374-201ENST00000365606 101 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-1113P-201ENST00000384348 107 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 SNORD38C-201ENST00000384381 69 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 RPS12P2-201ENST00000439728 269 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 AC104389.3-201ENST00000445629 235 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 AC114811.1-201ENST00000507207 168 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 MIR4778-201ENST00000577635 80 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 MIR4762-201ENST00000585261 75 ntBASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SYNGAP1Q96PV0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-349P-201ENST00000362402 107 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 U8.5-201ENST00000364528 136 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.328-201ENST00000365208 113 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-440P-201ENST00000390882 105 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 RNU7-80P-201ENST00000459562 61 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-830P-201ENST00000516353 107 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 AC022202.1-201ENST00000613515 211 ntBASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SYNGAP1Q96PV0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-970P-201ENST00000516312 107 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 RNU7-28P-201ENST00000516759 62 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 AC141557.1-201ENST00000540982 400 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 MIR3169-201ENST00000578032 83 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 HSPE1P19-201ENST00000603327 295 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 AP001318.4-201ENST00000616637 121 ntBASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYNGAP1Q96PV0 SNORD114-26-201ENST00000363543 72 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 SNORA25.6-201ENST00000364121 118 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-1131P-201ENST00000364955 107 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-905P-201ENST00000384434 107 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 SNORA40.13-201ENST00000516379 120 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 AC022523.2-201ENST00000561045 150 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 SNORA4-201ENST00000584302 138 ntBASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SYNGAP1Q96PV0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR302B-201ENST00000362188 73 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 U8.6-201ENST00000364939 135 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 Y_RNA.348-201ENST00000365403 103 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR627-201ENST00000384979 97 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 SNRPGP14-201ENST00000435400 219 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 RNU7-123P-201ENST00000515911 60 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR3126-201ENST00000577443 74 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR5094-201ENST00000578766 85 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR4305-201ENST00000583252 102 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 SNORA28-201ENST00000606769 126 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 AL449363.1-201ENST00000617815 186 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 U4atac.1-201ENST00000618345 95 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR8054-201ENST00000620877 86 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 AC091932.4-201ENST00000623386 200 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 MIR1291-201ENST00000627649 87 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
SYNGAP1Q96PV0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-938P-201ENST00000411285 103 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-109P-201ENST00000516364 107 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-184P-201ENST00000516514 107 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 AC068339.1-201ENST00000526965 141 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 MIR6779-201ENST00000617283 64 ntBASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
SYNGAP1Q96PV0 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-294P-201ENST00000364999 102 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms