Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC103810.6-201ENST00000606708 136 ntBASIC3.44□□□□□ -1.86
TRIM47Q96LD4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM47Q96LD4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM47Q96LD4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 MIRLET7A1-201ENST00000362295 80 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU6-649P-201ENST00000384463 107 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 MIR196B-201ENST00000384852 84 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU6-1319P-201ENST00000390855 104 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU6-747P-201ENST00000390928 104 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU6-241P-201ENST00000391148 104 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 MIR548G-201ENST00000408442 89 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU6-177P-201ENST00000411257 104 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 AC087499.2-201ENST00000432861 149 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 RNU7-34P-201ENST00000459394 64 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 AC092185.1-201ENST00000491371 97 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 AC107016.2-201ENST00000547968 190 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 AC020891.4-201ENST00000605745 93 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 U6.108-201ENST00000637764 58 ntBASIC3.43□□□□□ -1.86
TRIM47Q96LD4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM47Q96LD4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 AC073325.2-201ENST00000339545 159 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 MIR34C-201ENST00000384831 77 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RNU6-1307P-201ENST00000391012 103 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 MIR1236-201ENST00000408340 102 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RNU6-380P-201ENST00000410207 107 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RNU1-41P-201ENST00000516161 162 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RNU1-48P-201ENST00000516400 162 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 RNU6-448P-201ENST00000517052 107 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 AP000867.2-201ENST00000532468 320 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 AC079600.2-201ENST00000550076 130 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 MIR6841-201ENST00000637129 72 ntBASIC3.42□□□□□ -1.86
TRIM47Q96LD4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM47Q96LD4 SNORD115-34-201ENST00000362441 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-12-201ENST00000362583 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-29-201ENST00000362834 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-9-201ENST00000362912 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-21-201ENST00000362963 81 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-14-201ENST00000363090 81 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-41-201ENST00000363608 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-11-201ENST00000363616 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-5-201ENST00000363633 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-4-201ENST00000363810 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-6-201ENST00000363942 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-42-201ENST00000364273 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-15-201ENST00000364809 81 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-26-201ENST00000365067 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-10-201ENST00000365073 81 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-43-201ENST00000365503 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 SNORD115-36-201ENST00000365629 82 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 RNU6-141P-201ENST00000410499 105 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 RNU6-519P-201ENST00000410590 108 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM47Q96LD4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM47Q96LD4 RNU6-634P-201ENST00000459134 106 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 RNU6-586P-201ENST00000517265 104 ntBASIC3.41□□□□□ -1.86
TRIM47Q96LD4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM47Q96LD4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM47Q96LD4 RNU6-686P-201ENST00000364839 107 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 SNORA70B-201ENST00000384210 135 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 RNU1-142P-201ENST00000516682 145 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 RNU6-557P-201ENST00000516842 110 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 AC007536.1-201ENST00000533382 349 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 MIR3152-201ENST00000579801 74 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 MIR4765-201ENST00000585007 77 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 RNU6-90P-201ENST00000606352 106 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 MIR7843-201ENST00000622274 79 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM47Q96LD4 GABRG2-229ENST00000641017 3628 ntBASIC3.4□□□□□ -1.87
TRIM47Q96LD4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM47Q96LD4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM47Q96LD4 SNORA25.6-201ENST00000364121 118 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 RNU6-296P-201ENST00000384608 107 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 MIR206-201ENST00000384872 86 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 RNA5SP274-201ENST00000410484 108 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 AC123900.1-201ENST00000420390 96 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM47Q96LD4 AC087499.7-201ENST00000441958 109 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 SNORD109B-201ENST00000458961 67 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 SNORD109A-201ENST00000459128 67 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM47Q96LD4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.39□□□□□ -1.87
TRIM47Q96LD4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM47Q96LD4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM47Q96LD4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM47Q96LD4 MIR340-201ENST00000362125 95 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 Y_RNA.168-201ENST00000363740 102 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 RNU6-800P-201ENST00000384473 103 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 MIR181B2-201ENST00000385004 89 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms