Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 MIR4791-201ENST00000607666 84 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 AC006441.5-201ENST00000612680 209 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 AC007742.2-201ENST00000618226 398 ntBASIC0.72□□□□□ -2.29
VPS39Q96JC1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 RNA5SP48-201ENST00000363969 126 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 SNORD89-201ENST00000390981 114 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 RNU6-651P-201ENST00000411040 105 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 RNU6-570P-201ENST00000517051 105 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 AC007751.1-201ENST00000529260 376 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS39Q96JC1 AL021707.8-201ENST00000609428 183 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 MTND1P7-201ENST00000632801 297 ntBASIC0.71□□□□□ -2.3
VPS39Q96JC1 SNORA25.1-201ENST00000362326 128 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 RNU6-326P-201ENST00000365480 107 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 COX6CP6-201ENST00000490840 228 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 SNORA27.4-201ENST00000516650 95 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 uc_338.4-201ENST00000616635 176 ntBASIC0.7□□□□□ -2.3
VPS39Q96JC1 SNORA33.2-201ENST00000365413 134 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 RNU6-144P-201ENST00000383951 107 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 RNU6-985P-201ENST00000410182 104 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 AC090844.1-201ENST00000422019 156 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
VPS39Q96JC1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 SNORA51.10-201ENST00000384418 136 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 MIR548O-201ENST00000408583 114 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 MTATP8P1-201ENST00000467115 207 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS39Q96JC1 AC113410.1-201ENST00000505029 247 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 MIR4724-201ENST00000579485 89 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
VPS39Q96JC1 MIR367-201ENST00000362299 68 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 RNU6-211P-201ENST00000384047 107 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 SNORA53-201ENST00000391141 249 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AC015818.7-201ENST00000428754 109 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AC087499.7-201ENST00000441958 109 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 SERF1AP1-201ENST00000514575 187 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 RNU2-13P-201ENST00000515909 113 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AL078603.1-201ENST00000603824 313 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 AC243994.1-201ENST00000618627 109 ntBASIC0.67□□□□□ -2.3
VPS39Q96JC1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
VPS39Q96JC1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
VPS39Q96JC1 SNORD45.3-201ENST00000363836 72 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 RNU6-514P-201ENST00000384208 107 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 RNU6-1289P-201ENST00000384431 106 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 RNU6-125P-201ENST00000384505 107 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 RNU6-938P-201ENST00000411285 103 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 AL731563.1-201ENST00000442202 214 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 U7.7-201ENST00000459276 60 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 MTCO2P24-201ENST00000515611 426 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS39Q96JC1 AP001282.2-201ENST00000616149 309 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
VPS39Q96JC1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
VPS39Q96JC1 SNORD113.3-201ENST00000364630 78 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 MIR548A2-201ENST00000384956 97 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 MT-TT-201ENST00000387460 66 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 SNORD77.4-201ENST00000516158 81 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 AC037487.3-201ENST00000606668 112 ntBASIC0.65□□□□□ -2.31
VPS39Q96JC1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNU6-238P-201ENST00000363313 106 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNU6-1109P-201ENST00000391187 107 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNA5SP496-201ENST00000391240 109 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 AC244023.1-201ENST00000426884 112 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNU11-2P-201ENST00000516898 142 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 AC006006.1-201ENST00000603082 144 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 AC242498.1-201ENST00000604134 111 ntBASIC0.64□□□□□ -2.31
VPS39Q96JC1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS39Q96JC1 UBE2WP1-201ENST00000362030 340 ntBASIC0.63□□□□□ -2.31
VPS39Q96JC1 RNU6-369P-201ENST00000362515 102 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms