Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHFRQ96EP1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CHFRQ96EP1 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 Y_RNA.17-201ENST00000362433 111 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CHFRQ96EP1 SNRPGP10-201ENST00000432323 225 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 HMGN1P7-201ENST00000491722 313 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 RNU6-65P-201ENST00000516332 98 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 AC022523.2-201ENST00000561045 150 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.32□□□□□ -2.04
CHFRQ96EP1 MIR1248-201ENST00000629190 106 ntBASIC2.32□□□□□ -2.04
CHFRQ96EP1 Y_RNA.290-201ENST00000364879 114 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 Y_RNA.298-201ENST00000364960 107 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 RNU6-813P-201ENST00000384691 107 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 MIR548D2-201ENST00000384955 97 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 MIR1255A-201ENST00000408338 113 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.31□□□□□ -2.04
CHFRQ96EP1 AL603825.1-201ENST00000438481 80 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 HMGN2P18-201ENST00000450680 270 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 SUMO2P16-201ENST00000519475 264 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
CHFRQ96EP1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.31□□□□□ -2.04
CHFRQ96EP1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHFRQ96EP1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CHFRQ96EP1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 RNU6-690P-201ENST00000365242 106 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.3□□□□□ -2.04
CHFRQ96EP1 RNU7-128P-201ENST00000517247 62 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 AC073413.2-201ENST00000604332 360 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 AL162726.3-218ENST00000636401 95 ntBASIC2.3□□□□□ -2.04
CHFRQ96EP1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHFRQ96EP1 RNU1-96P-201ENST00000364163 162 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 SNORA63D-201ENST00000364359 132 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 AC022137.1-201ENST00000483735 151 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 AC108210.2-201ENST00000503681 201 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 RNU7-123P-201ENST00000515911 60 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 RNU2-34P-201ENST00000516534 121 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 RNU6-965P-201ENST00000516721 96 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 AC021443.1-201ENST00000604478 211 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
CHFRQ96EP1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
CHFRQ96EP1 MIR340-201ENST00000362125 95 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 RNY3P2-201ENST00000362918 102 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 SNORA2.2-201ENST00000365473 135 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 RNU6-438P-201ENST00000365561 103 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 RNU6-787P-201ENST00000384032 107 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.28□□□□□ -2.04
CHFRQ96EP1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.28□□□□□ -2.04
CHFRQ96EP1 SCARNA23-201ENST00000516060 130 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
CHFRQ96EP1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHFRQ96EP1 RNA5SP99-201ENST00000364020 114 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 Y_RNA.221-201ENST00000364248 96 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 MIR759-201ENST00000390224 91 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AC060773.1-201ENST00000421698 310 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AC233266.1-201ENST00000454518 96 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 RNU7-164P-201ENST00000459221 62 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 DEFB131E-201ENST00000532329 154 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AC242852.1-201ENST00000612151 96 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 AC244015.1-201ENST00000622301 99 ntBASIC2.27□□□□□ -2.05
CHFRQ96EP1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHFRQ96EP1 Y_RNA.73-201ENST00000362910 113 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-1099P-201ENST00000363533 107 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 SNORA33-201ENST00000363664 130 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-816P-201ENST00000390914 107 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 AL353689.1-201ENST00000438895 199 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RPL39P25-201ENST00000449384 154 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 AC055731.1-201ENST00000474387 401 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU2-35P-201ENST00000516446 142 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-856P-201ENST00000516959 98 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU6-586P-201ENST00000517265 104 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
CHFRQ96EP1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms