Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNORD45.3-201ENST00000363836 72 ntBASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 RNU6-275P-201ENST00000364910 107 ntBASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 SNRPGP8-201ENST00000454064 226 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 RNA5SP153-201ENST00000516498 76 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 RNU6-365P-201ENST00000517113 106 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM43Q96BQ3 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 RNU6-484P-201ENST00000384016 107 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 AC015922.2-201ENST00000435593 184 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 RNU6-561P-201ENST00000516222 102 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 MIR3935-201ENST00000583472 104 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 AC006441.5-201ENST00000612680 209 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 U6.106-201ENST00000636360 105 ntBASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
TRIM43Q96BQ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 SNORD114-22-201ENST00000365423 72 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 MIR136-201ENST00000385207 82 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 RNU4-43P-201ENST00000410628 137 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 RNU6-197P-201ENST00000516680 100 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 MIR4421-201ENST00000578133 69 ntBASIC1.76□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.23-201ENST00000362496 106 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 SNORA2.2-201ENST00000365473 135 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 SNRPGP14-201ENST00000435400 219 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 SNRPGP13-201ENST00000442212 177 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 RNU6-504P-201ENST00000516568 104 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 RNU6-861P-201ENST00000516745 106 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 AL160236.1-201ENST00000556317 195 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 AC015726.2-201ENST00000620112 122 ntBASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM43Q96BQ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.270-201ENST00000364693 104 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 RNU6-53P-201ENST00000365367 106 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 RNU2-64P-201ENST00000411315 191 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AC079140.2-201ENST00000506193 142 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 RNA5SP480-201ENST00000516840 109 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AL078603.1-201ENST00000603824 313 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AC098479.1-201ENST00000609225 154 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
TRIM43Q96BQ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 SNORD24-201ENST00000383884 75 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 RNU6-643P-201ENST00000384018 107 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 MIR526A1-201ENST00000384897 85 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 AL451046.2-201ENST00000403074 277 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 MIR548O-201ENST00000408583 114 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 AC090049.2-201ENST00000550377 109 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM43Q96BQ3 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 RNU6-682P-201ENST00000363843 106 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.240-201ENST00000364469 95 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 RNU6-907P-201ENST00000390924 102 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 AC006461.1-201ENST00000412637 326 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 MIR4431-201ENST00000579990 94 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 MIR4422-201ENST00000581938 83 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 AC097639.2-201ENST00000603159 172 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 AL513534.2-201ENST00000603836 250 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 AL365434.2-201ENST00000607979 234 ntBASIC1.72□□□□□ -2.13
TRIM43Q96BQ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms